Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.27■□□□□ 0.2
ABCA1O95477 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.27■□□□□ 0.2
ABCA1O95477 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.27■□□□□ 0.2
ABCA1O95477 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ABCA1O95477 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.27■□□□□ 0.2
ABCA1O95477 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
ABCA1O95477 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.27■□□□□ 0.19
ABCA1O95477 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ABCA1O95477 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 BX664615.1-201ENST00000443558 458 ntBASIC16.26■□□□□ 0.19
ABCA1O95477 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.26■□□□□ 0.19
ABCA1O95477 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.26■□□□□ 0.19
ABCA1O95477 FAM87A-204ENST00000613235 858 ntBASIC16.26■□□□□ 0.19
ABCA1O95477 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.26■□□□□ 0.19
ABCA1O95477 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 RNF152P1-201ENST00000397754 604 ntBASIC16.26■□□□□ 0.19
ABCA1O95477 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
ABCA1O95477 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.26■□□□□ 0.19
ABCA1O95477 EGLN1P1-201ENST00000531623 762 ntBASIC16.26■□□□□ 0.19
ABCA1O95477 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.26■□□□□ 0.19
ABCA1O95477 AC073314.1-201ENST00000568729 2216 ntBASIC16.26■□□□□ 0.19
ABCA1O95477 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ABCA1O95477 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ABCA1O95477 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.25■□□□□ 0.19
ABCA1O95477 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.25■□□□□ 0.19
ABCA1O95477 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 INGX-201ENST00000359239 846 ntBASIC16.25■□□□□ 0.19
ABCA1O95477 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.25■□□□□ 0.19
ABCA1O95477 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.25■□□□□ 0.19
ABCA1O95477 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.25■□□□□ 0.19
ABCA1O95477 AC007663.1-201ENST00000438948 1240 ntBASIC16.25■□□□□ 0.19
ABCA1O95477 AC010203.1-204ENST00000548782 407 ntBASIC16.25■□□□□ 0.19
ABCA1O95477 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.25■□□□□ 0.19
ABCA1O95477 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
ABCA1O95477 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.25■□□□□ 0.19
ABCA1O95477 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ABCA1O95477 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.24■□□□□ 0.19
ABCA1O95477 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.24■□□□□ 0.19
ABCA1O95477 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ABCA1O95477 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.24■□□□□ 0.19
ABCA1O95477 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ABCA1O95477 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.24■□□□□ 0.19
ABCA1O95477 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ABCA1O95477 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms