Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
PCF11O94913 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
PCF11O94913 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC30.37■■■□□ 2.45
PCF11O94913 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC30.37■■■□□ 2.45
PCF11O94913 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PCF11O94913 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PCF11O94913 USP39-204ENST00000409766 2033 ntTSL 2 BASIC30.36■■■□□ 2.45
PCF11O94913 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC30.36■■■□□ 2.45
PCF11O94913 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
PCF11O94913 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC30.36■■■□□ 2.45
PCF11O94913 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
PCF11O94913 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC30.36■■■□□ 2.45
PCF11O94913 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC30.36■■■□□ 2.45
PCF11O94913 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCF11O94913 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
PCF11O94913 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC30.35■■■□□ 2.45
PCF11O94913 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC30.35■■■□□ 2.45
PCF11O94913 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 FAM8A6P-201ENST00000407496 1135 ntBASIC30.35■■■□□ 2.45
PCF11O94913 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC30.35■■■□□ 2.45
PCF11O94913 VPS72-207ENST00000640458 689 ntTSL 5 BASIC30.35■■■□□ 2.45
PCF11O94913 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PCF11O94913 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.34■■■□□ 2.45
PCF11O94913 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
PCF11O94913 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC30.34■■■□□ 2.45
PCF11O94913 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
PCF11O94913 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PCF11O94913 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
PCF11O94913 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC30.33■■■□□ 2.45
PCF11O94913 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PCF11O94913 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PCF11O94913 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
PCF11O94913 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC30.33■■■□□ 2.45
PCF11O94913 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC30.33■■■□□ 2.45
PCF11O94913 PRSS44-201ENST00000515154 1146 ntBASIC30.33■■■□□ 2.45
PCF11O94913 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC30.33■■■□□ 2.45
PCF11O94913 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.32■■■□□ 2.45
PCF11O94913 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC30.32■■■□□ 2.45
PCF11O94913 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
PCF11O94913 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.45
PCF11O94913 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
PCF11O94913 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.32■■■□□ 2.45
PCF11O94913 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.45
PCF11O94913 AC141257.4-201ENST00000634557 245 ntBASIC30.32■■■□□ 2.45
PCF11O94913 AC136944.6-201ENST00000634818 245 ntBASIC30.32■■■□□ 2.45
PCF11O94913 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
PCF11O94913 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC30.32■■■□□ 2.44
PCF11O94913 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC30.32■■■□□ 2.44
PCF11O94913 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC30.32■■■□□ 2.44
PCF11O94913 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
PCF11O94913 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC30.32■■■□□ 2.44
PCF11O94913 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCF11O94913 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
PCF11O94913 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC30.32■■■□□ 2.44
PCF11O94913 AC139887.4-201ENST00000607877 719 ntBASIC30.32■■■□□ 2.44
PCF11O94913 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
PCF11O94913 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.31■■■□□ 2.44
PCF11O94913 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.31■■■□□ 2.44
PCF11O94913 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC30.31■■■□□ 2.44
PCF11O94913 AL450487.1-201ENST00000426799 995 ntBASIC30.31■■■□□ 2.44
PCF11O94913 TSPY17P-201ENST00000450329 467 ntBASIC30.31■■■□□ 2.44
PCF11O94913 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.31■■■□□ 2.44
PCF11O94913 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC30.31■■■□□ 2.44
PCF11O94913 AL353719.1-201ENST00000566847 864 ntBASIC30.31■■■□□ 2.44
PCF11O94913 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC30.31■■■□□ 2.44
PCF11O94913 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 AC104417.2-201ENST00000562989 1793 ntBASIC30.31■■■□□ 2.44
PCF11O94913 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PCF11O94913 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC30.3■■■□□ 2.44
PCF11O94913 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PCF11O94913 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms