Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 MYC-209ENST00000641252 345 ntBASIC18.42■□□□□ 0.54
SCN2BO60939 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.42■□□□□ 0.54
SCN2BO60939 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
SCN2BO60939 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
SCN2BO60939 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCN2BO60939 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SCN2BO60939 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SCN2BO60939 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 ZNF815P-204ENST00000434898 1737 ntBASIC18.41■□□□□ 0.54
SCN2BO60939 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.41■□□□□ 0.54
SCN2BO60939 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SCN2BO60939 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCN2BO60939 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.41■□□□□ 0.54
SCN2BO60939 TEX21P-204ENST00000641479 1693 ntBASIC18.41■□□□□ 0.54
SCN2BO60939 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 AL161938.1-201ENST00000569833 2180 ntBASIC18.4■□□□□ 0.54
SCN2BO60939 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN2BO60939 NCF1B-203ENST00000435988 1254 ntBASIC18.4■□□□□ 0.54
SCN2BO60939 TSPY6P-201ENST00000448518 926 ntBASIC18.4■□□□□ 0.54
SCN2BO60939 RPS2P52-201ENST00000469610 820 ntBASIC18.4■□□□□ 0.54
SCN2BO60939 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN2BO60939 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.4■□□□□ 0.54
SCN2BO60939 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SCN2BO60939 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.4■□□□□ 0.54
SCN2BO60939 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCN2BO60939 AC141586.3-201ENST00000562166 1838 ntBASIC18.39■□□□□ 0.54
SCN2BO60939 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN2BO60939 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SCN2BO60939 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN2BO60939 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN2BO60939 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.39■□□□□ 0.53
SCN2BO60939 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.39■□□□□ 0.53
SCN2BO60939 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
SCN2BO60939 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.39■□□□□ 0.53
SCN2BO60939 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
SCN2BO60939 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SCN2BO60939 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCN2BO60939 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN2BO60939 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.38■□□□□ 0.53
SCN2BO60939 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
SCN2BO60939 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SCN2BO60939 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms