Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TRIM13O60858 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM13O60858 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM13O60858 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM13O60858 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM13O60858 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 GPX1P1-201ENST00000388829 606 ntBASIC19.11■□□□□ 0.65
TRIM13O60858 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM13O60858 AC093787.1-201ENST00000450396 207 ntBASIC19.11■□□□□ 0.65
TRIM13O60858 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM13O60858 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM13O60858 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.11■□□□□ 0.65
TRIM13O60858 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TRIM13O60858 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM13O60858 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 AC020763.4-201ENST00000623414 4170 ntBASIC19.11■□□□□ 0.65
TRIM13O60858 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 ZNF815P-204ENST00000434898 1737 ntBASIC19.11■□□□□ 0.65
TRIM13O60858 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM13O60858 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM13O60858 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM13O60858 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM13O60858 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM13O60858 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM13O60858 LSM12P1-201ENST00000411836 588 ntBASIC19.1■□□□□ 0.65
TRIM13O60858 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM13O60858 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRIM13O60858 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM13O60858 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TRIM13O60858 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.09■□□□□ 0.65
TRIM13O60858 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM13O60858 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM13O60858 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
TRIM13O60858 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM13O60858 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRIM13O60858 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM13O60858 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM13O60858 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.09■□□□□ 0.65
TRIM13O60858 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM13O60858 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM13O60858 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM13O60858 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRIM13O60858 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM13O60858 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM13O60858 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM13O60858 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.65
TRIM13O60858 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms