Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 FAM197Y8-203ENST00000450145 560 ntBASIC18.93■□□□□ 0.62
GFRA3O60609 HLA-J-203ENST00000494367 1087 ntBASIC18.93■□□□□ 0.62
GFRA3O60609 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.93■□□□□ 0.62
GFRA3O60609 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.93■□□□□ 0.62
GFRA3O60609 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.93■□□□□ 0.62
GFRA3O60609 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.93■□□□□ 0.62
GFRA3O60609 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.93■□□□□ 0.62
GFRA3O60609 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.93■□□□□ 0.62
GFRA3O60609 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
GFRA3O60609 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
GFRA3O60609 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFRA3O60609 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.93■□□□□ 0.62
GFRA3O60609 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA3O60609 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA3O60609 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.92■□□□□ 0.62
GFRA3O60609 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.92■□□□□ 0.62
GFRA3O60609 RPL13AP23-201ENST00000480739 586 ntBASIC18.92■□□□□ 0.62
GFRA3O60609 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.92■□□□□ 0.62
GFRA3O60609 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
GFRA3O60609 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.92■□□□□ 0.62
GFRA3O60609 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA3O60609 REXO1L6P-202ENST00000619970 1078 ntBASIC18.92■□□□□ 0.62
GFRA3O60609 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
GFRA3O60609 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA3O60609 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
GFRA3O60609 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA3O60609 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA3O60609 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
GFRA3O60609 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA3O60609 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 AF238378.1-201ENST00000526806 358 ntBASIC18.91■□□□□ 0.62
GFRA3O60609 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.91■□□□□ 0.62
GFRA3O60609 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.91■□□□□ 0.62
GFRA3O60609 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA3O60609 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.9■□□□□ 0.62
GFRA3O60609 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.9■□□□□ 0.62
GFRA3O60609 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GFRA3O60609 AC010327.4-202ENST00000591484 748 ntBASIC18.9■□□□□ 0.62
GFRA3O60609 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.9■□□□□ 0.62
GFRA3O60609 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
GFRA3O60609 AC243591.1-201ENST00000452967 1364 ntBASIC18.9■□□□□ 0.62
GFRA3O60609 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
GFRA3O60609 LINC00167-201ENST00000530583 1419 ntBASIC18.9■□□□□ 0.62
GFRA3O60609 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GFRA3O60609 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA3O60609 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GFRA3O60609 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GFRA3O60609 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.89■□□□□ 0.61
GFRA3O60609 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
GFRA3O60609 KRT18P67-201ENST00000432816 1264 ntBASIC18.89■□□□□ 0.61
GFRA3O60609 AF186996.4-201ENST00000467186 377 ntBASIC18.89■□□□□ 0.61
GFRA3O60609 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.89■□□□□ 0.61
GFRA3O60609 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.89■□□□□ 0.61
GFRA3O60609 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.89■□□□□ 0.61
GFRA3O60609 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.89■□□□□ 0.61
GFRA3O60609 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA3O60609 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GFRA3O60609 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.88■□□□□ 0.61
GFRA3O60609 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA3O60609 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA3O60609 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA3O60609 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA3O60609 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA3O60609 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.88■□□□□ 0.61
GFRA3O60609 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.88■□□□□ 0.61
GFRA3O60609 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms