Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCNT1O60563 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCNT1O60563 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.09■■□□□ 1.13
CCNT1O60563 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCNT1O60563 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCNT1O60563 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCNT1O60563 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.09■■□□□ 1.13
CCNT1O60563 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
CCNT1O60563 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.08■■□□□ 1.13
CCNT1O60563 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CCNT1O60563 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CCNT1O60563 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CCNT1O60563 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CCNT1O60563 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CCNT1O60563 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCNT1O60563 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.08■■□□□ 1.13
CCNT1O60563 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.08■■□□□ 1.12
CCNT1O60563 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCNT1O60563 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CCNT1O60563 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.08■■□□□ 1.12
CCNT1O60563 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.08■■□□□ 1.12
CCNT1O60563 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CCNT1O60563 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CCNT1O60563 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.07■■□□□ 1.12
CCNT1O60563 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CCNT1O60563 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 RARRES2P10-201ENST00000564312 460 ntBASIC22.07■■□□□ 1.12
CCNT1O60563 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC22.07■■□□□ 1.12
CCNT1O60563 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC22.07■■□□□ 1.12
CCNT1O60563 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.07■■□□□ 1.12
CCNT1O60563 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCNT1O60563 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.07■■□□□ 1.12
CCNT1O60563 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.07■■□□□ 1.12
CCNT1O60563 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 AC007952.6-201ENST00000573168 2673 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 AC003957.1-201ENST00000625108 2673 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.06■■□□□ 1.12
CCNT1O60563 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC22.06■■□□□ 1.12
CCNT1O60563 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.06■■□□□ 1.12
CCNT1O60563 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CCNT1O60563 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 AC093484.2-201ENST00000580996 2166 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 LINC01465-201ENST00000408887 1940 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 ZNF815P-204ENST00000434898 1737 ntBASIC22.06■■□□□ 1.12
CCNT1O60563 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCNT1O60563 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.05■■□□□ 1.12
CCNT1O60563 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.05■■□□□ 1.12
CCNT1O60563 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.05■■□□□ 1.12
CCNT1O60563 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.05■■□□□ 1.12
CCNT1O60563 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.05■■□□□ 1.12
CCNT1O60563 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC22.05■■□□□ 1.12
CCNT1O60563 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.05■■□□□ 1.12
CCNT1O60563 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.05■■□□□ 1.12
CCNT1O60563 HLA-A-209ENST00000638375 975 ntBASIC22.05■■□□□ 1.12
CCNT1O60563 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCNT1O60563 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 Z82202.1-201ENST00000623446 1880 ntBASIC22.05■■□□□ 1.12
CCNT1O60563 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.05■■□□□ 1.12
CCNT1O60563 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.05■■□□□ 1.12
CCNT1O60563 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCNT1O60563 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms