Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CXCL13O43927 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CXCL13O43927 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CXCL13O43927 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL13O43927 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.42■□□□□ 0.38
CXCL13O43927 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.42■□□□□ 0.38
CXCL13O43927 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.42■□□□□ 0.38
CXCL13O43927 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.42■□□□□ 0.38
CXCL13O43927 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.42■□□□□ 0.38
CXCL13O43927 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.42■□□□□ 0.38
CXCL13O43927 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CXCL13O43927 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
CXCL13O43927 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CXCL13O43927 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CXCL13O43927 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL13O43927 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL13O43927 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 KRT16P1-201ENST00000399124 1418 ntBASIC17.41■□□□□ 0.38
CXCL13O43927 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CXCL13O43927 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL13O43927 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.41■□□□□ 0.38
CXCL13O43927 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.41■□□□□ 0.38
CXCL13O43927 AL445675.2-201ENST00000620291 557 ntBASIC17.41■□□□□ 0.38
CXCL13O43927 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CXCL13O43927 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.41■□□□□ 0.38
CXCL13O43927 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CXCL13O43927 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CXCL13O43927 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 AFG3L1P-217ENST00000557444 2447 ntBASIC17.4■□□□□ 0.38
CXCL13O43927 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CXCL13O43927 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCL13O43927 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CXCL13O43927 AL355355.2-201ENST00000442321 338 ntBASIC17.4■□□□□ 0.38
CXCL13O43927 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.4■□□□□ 0.38
CXCL13O43927 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.4■□□□□ 0.38
CXCL13O43927 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CXCL13O43927 MIR4785-201ENST00000585005 73 ntBASIC17.4■□□□□ 0.38
CXCL13O43927 AC026471.5-201ENST00000615068 467 ntBASIC17.4■□□□□ 0.38
CXCL13O43927 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.4■□□□□ 0.38
CXCL13O43927 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 AC125437.2-201ENST00000625180 2167 ntBASIC17.4■□□□□ 0.38
CXCL13O43927 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.4■□□□□ 0.38
CXCL13O43927 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CXCL13O43927 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.39■□□□□ 0.38
CXCL13O43927 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CXCL13O43927 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.39■□□□□ 0.37
CXCL13O43927 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CXCL13O43927 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CXCL13O43927 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CXCL13O43927 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.39■□□□□ 0.37
CXCL13O43927 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 KRT17P2-201ENST00000300992 1314 ntBASIC17.39■□□□□ 0.37
CXCL13O43927 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.39■□□□□ 0.37
CXCL13O43927 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
CXCL13O43927 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CXCL13O43927 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms