Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SSNA1O43805 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.55■□□□□ 0.24
SSNA1O43805 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.55■□□□□ 0.24
SSNA1O43805 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.55■□□□□ 0.24
SSNA1O43805 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SSNA1O43805 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SSNA1O43805 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SSNA1O43805 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.54■□□□□ 0.24
SSNA1O43805 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 KRT8P36-201ENST00000489121 1440 ntBASIC16.54■□□□□ 0.24
SSNA1O43805 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SSNA1O43805 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SSNA1O43805 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.54■□□□□ 0.24
SSNA1O43805 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SSNA1O43805 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.54■□□□□ 0.24
SSNA1O43805 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SSNA1O43805 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SSNA1O43805 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
SSNA1O43805 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SSNA1O43805 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.53■□□□□ 0.24
SSNA1O43805 AC067852.2-201ENST00000590513 2313 ntBASIC16.53■□□□□ 0.24
SSNA1O43805 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 PRORSD1P-202ENST00000563365 2154 ntBASIC16.53■□□□□ 0.24
SSNA1O43805 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 AL033527.3-201ENST00000566366 1196 ntBASIC16.53■□□□□ 0.24
SSNA1O43805 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.53■□□□□ 0.24
SSNA1O43805 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SSNA1O43805 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 AC116050.2-201ENST00000612102 1779 ntBASIC16.53■□□□□ 0.24
SSNA1O43805 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SSNA1O43805 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SSNA1O43805 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.53■□□□□ 0.24
SSNA1O43805 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
SSNA1O43805 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SSNA1O43805 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SSNA1O43805 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.52■□□□□ 0.24
SSNA1O43805 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.52■□□□□ 0.24
SSNA1O43805 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.52■□□□□ 0.24
SSNA1O43805 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
SSNA1O43805 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.52■□□□□ 0.24
SSNA1O43805 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 TSPY9P-201ENST00000440215 945 ntBASIC16.52■□□□□ 0.24
SSNA1O43805 TSPY11P-201ENST00000442607 1045 ntBASIC16.52■□□□□ 0.24
SSNA1O43805 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SSNA1O43805 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms