Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 AC005332.7-201ENST00000614046 2005 ntBASIC17.32■□□□□ 0.36
TRAF3IP2O43734 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 FAM201B-201ENST00000458407 597 ntBASIC17.32■□□□□ 0.36
TRAF3IP2O43734 AC133681.1-201ENST00000465482 601 ntBASIC17.32■□□□□ 0.36
TRAF3IP2O43734 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 ZNF815P-204ENST00000434898 1737 ntBASIC17.32■□□□□ 0.36
TRAF3IP2O43734 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAF3IP2O43734 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 C1QL1P1-201ENST00000568105 661 ntBASIC17.31■□□□□ 0.36
TRAF3IP2O43734 AC004264.1-201ENST00000608354 794 ntBASIC17.31■□□□□ 0.36
TRAF3IP2O43734 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAF3IP2O43734 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 ITM2C-210ENST00000620962 501 ntBASIC17.3■□□□□ 0.36
TRAF3IP2O43734 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.3■□□□□ 0.36
TRAF3IP2O43734 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.29■□□□□ 0.36
TRAF3IP2O43734 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAF3IP2O43734 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms