Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.8■■□□□ 1.08
ACTN4O43707 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACTN4O43707 AL049812.1-201ENST00000432563 2267 ntBASIC21.8■■□□□ 1.08
ACTN4O43707 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACTN4O43707 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ACTN4O43707 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.79■■□□□ 1.08
ACTN4O43707 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 AC008687.6-201ENST00000596318 630 ntBASIC21.79■■□□□ 1.08
ACTN4O43707 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.79■■□□□ 1.08
ACTN4O43707 AL121829.2-201ENST00000620908 328 ntBASIC21.79■■□□□ 1.08
ACTN4O43707 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ACTN4O43707 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.79■■□□□ 1.08
ACTN4O43707 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ACTN4O43707 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 KRT8P8-201ENST00000434750 1448 ntBASIC21.79■■□□□ 1.08
ACTN4O43707 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.79■■□□□ 1.08
ACTN4O43707 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACTN4O43707 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
ACTN4O43707 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTN4O43707 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
ACTN4O43707 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.78■■□□□ 1.08
ACTN4O43707 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTN4O43707 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTN4O43707 KRT18P16-201ENST00000510337 1294 ntBASIC21.78■■□□□ 1.08
ACTN4O43707 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.78■■□□□ 1.08
ACTN4O43707 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.78■■□□□ 1.08
ACTN4O43707 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.78■■□□□ 1.08
ACTN4O43707 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACTN4O43707 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.78■■□□□ 1.08
ACTN4O43707 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ACTN4O43707 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ACTN4O43707 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.78■■□□□ 1.08
ACTN4O43707 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
ACTN4O43707 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ACTN4O43707 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.77■■□□□ 1.08
ACTN4O43707 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ACTN4O43707 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ACTN4O43707 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.77■■□□□ 1.07
ACTN4O43707 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
ACTN4O43707 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
ACTN4O43707 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ACTN4O43707 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ACTN4O43707 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.76■■□□□ 1.07
ACTN4O43707 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
ACTN4O43707 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.76■■□□□ 1.07
ACTN4O43707 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.76■■□□□ 1.07
ACTN4O43707 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms