Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SNAI2O43623 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SNAI2O43623 PTBP1P-201ENST00000554374 1601 ntBASIC14.5□□□□□ -0.09
SNAI2O43623 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 LINC01465-201ENST00000408887 1940 ntBASIC14.5□□□□□ -0.09
SNAI2O43623 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SNAI2O43623 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SNAI2O43623 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 KRT16P6-202ENST00000425692 1426 ntBASIC14.49□□□□□ -0.09
SNAI2O43623 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 KRT8P17-201ENST00000453110 1448 ntBASIC14.49□□□□□ -0.09
SNAI2O43623 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SNAI2O43623 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.49□□□□□ -0.09
SNAI2O43623 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.49□□□□□ -0.09
SNAI2O43623 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
SNAI2O43623 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SNAI2O43623 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.49□□□□□ -0.09
SNAI2O43623 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.49□□□□□ -0.09
SNAI2O43623 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNAI2O43623 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.48□□□□□ -0.09
SNAI2O43623 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNAI2O43623 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SNAI2O43623 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.48□□□□□ -0.09
SNAI2O43623 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.48□□□□□ -0.09
SNAI2O43623 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 CYP21A1P-202ENST00000354927 1481 ntBASIC14.48□□□□□ -0.09
SNAI2O43623 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNAI2O43623 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SNAI2O43623 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SNAI2O43623 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
SNAI2O43623 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.47□□□□□ -0.09
SNAI2O43623 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.47□□□□□ -0.09
SNAI2O43623 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNAI2O43623 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SNAI2O43623 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms