Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP2A1O14983 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.26■■□□□ 1.15
ATP2A1O14983 KRT8P41-201ENST00000533985 1514 ntBASIC22.26■■□□□ 1.15
ATP2A1O14983 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP2A1O14983 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP2A1O14983 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP2A1O14983 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
ATP2A1O14983 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
ATP2A1O14983 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP2A1O14983 AC007663.1-201ENST00000438948 1240 ntBASIC22.26■■□□□ 1.15
ATP2A1O14983 CA15P1-201ENST00000481698 905 ntBASIC22.26■■□□□ 1.15
ATP2A1O14983 AL138966.2-201ENST00000621997 464 ntBASIC22.26■■□□□ 1.15
ATP2A1O14983 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP2A1O14983 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP2A1O14983 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
ATP2A1O14983 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP2A1O14983 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ATP2A1O14983 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP2A1O14983 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP2A1O14983 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ATP2A1O14983 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ATP2A1O14983 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP2A1O14983 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC22.25■■□□□ 1.15
ATP2A1O14983 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ATP2A1O14983 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.24■■□□□ 1.15
ATP2A1O14983 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.24■■□□□ 1.15
ATP2A1O14983 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ATP2A1O14983 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.24■■□□□ 1.15
ATP2A1O14983 TSPY17P-201ENST00000450329 467 ntBASIC22.24■■□□□ 1.15
ATP2A1O14983 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
ATP2A1O14983 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ATP2A1O14983 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ATP2A1O14983 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP2A1O14983 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.23■■□□□ 1.15
ATP2A1O14983 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ATP2A1O14983 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
ATP2A1O14983 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
ATP2A1O14983 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ATP2A1O14983 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC22.23■■□□□ 1.15
ATP2A1O14983 AL353719.1-201ENST00000566847 864 ntBASIC22.23■■□□□ 1.15
ATP2A1O14983 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ATP2A1O14983 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATP2A1O14983 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ATP2A1O14983 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.23■■□□□ 1.15
ATP2A1O14983 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
ATP2A1O14983 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
ATP2A1O14983 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.22■■□□□ 1.15
ATP2A1O14983 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.22■■□□□ 1.15
ATP2A1O14983 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.22■■□□□ 1.15
ATP2A1O14983 CKBP1-201ENST00000565489 1086 ntBASIC22.22■■□□□ 1.15
ATP2A1O14983 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.22■■□□□ 1.15
ATP2A1O14983 NTF6B-201ENST00000591913 560 ntBASIC22.22■■□□□ 1.15
ATP2A1O14983 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.22■■□□□ 1.15
ATP2A1O14983 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.22■■□□□ 1.15
ATP2A1O14983 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATP2A1O14983 LINC01465-201ENST00000408887 1940 ntBASIC22.21■■□□□ 1.15
ATP2A1O14983 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATP2A1O14983 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATP2A1O14983 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms