Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.54■□□□□ 0.88
CLDN5O00501 AC011506.1-201ENST00000474329 610 ntBASIC20.54■□□□□ 0.88
CLDN5O00501 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN5O00501 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.54■□□□□ 0.88
CLDN5O00501 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.54■□□□□ 0.88
CLDN5O00501 AC131212.4-201ENST00000623606 975 ntBASIC20.54■□□□□ 0.88
CLDN5O00501 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN5O00501 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN5O00501 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN5O00501 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN5O00501 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLDN5O00501 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN5O00501 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN5O00501 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
CLDN5O00501 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN5O00501 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN5O00501 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CLDN5O00501 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN5O00501 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN5O00501 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 AC116562.2-201ENST00000507042 360 ntBASIC20.53■□□□□ 0.88
CLDN5O00501 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN5O00501 BX088651.1-201ENST00000540551 451 ntBASIC20.53■□□□□ 0.88
CLDN5O00501 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN5O00501 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN5O00501 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN5O00501 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN5O00501 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
CLDN5O00501 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN5O00501 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN5O00501 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN5O00501 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN5O00501 TREX1-205ENST00000625293 1783 ntBASIC20.52■□□□□ 0.88
CLDN5O00501 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN5O00501 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CLDN5O00501 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN5O00501 AL158211.5-201ENST00000623583 2518 ntBASIC20.52■□□□□ 0.88
CLDN5O00501 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN5O00501 RBM17P1-201ENST00000453646 1190 ntBASIC20.52■□□□□ 0.88
CLDN5O00501 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN5O00501 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN5O00501 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN5O00501 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CLDN5O00501 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLDN5O00501 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 AC079598.2-202ENST00000546624 1451 ntBASIC20.51■□□□□ 0.87
CLDN5O00501 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN5O00501 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CLDN5O00501 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.51■□□□□ 0.87
CLDN5O00501 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN5O00501 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN5O00501 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.51■□□□□ 0.87
CLDN5O00501 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.51■□□□□ 0.87
CLDN5O00501 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.51■□□□□ 0.87
CLDN5O00501 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN5O00501 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 MIR6786-201ENST00000616843 113 ntBASIC20.51■□□□□ 0.87
CLDN5O00501 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN5O00501 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN5O00501 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN5O00501 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN5O00501 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
CLDN5O00501 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
CLDN5O00501 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CLDN5O00501 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN5O00501 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.5■□□□□ 0.87
CLDN5O00501 AC008040.2-201ENST00000461049 708 ntBASIC20.5■□□□□ 0.87
CLDN5O00501 B3GAT3P1-201ENST00000471720 806 ntBASIC20.5■□□□□ 0.87
CLDN5O00501 Z85996.1-201ENST00000494644 937 ntBASIC20.5■□□□□ 0.87
CLDN5O00501 AP000525.1-201ENST00000608286 694 ntBASIC20.5■□□□□ 0.87
CLDN5O00501 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN5O00501 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms