Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RCCD1A6NED2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RCCD1A6NED2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 RARRES2P6-201ENST00000567333 442 ntBASIC20.67■□□□□ 0.9
RCCD1A6NED2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RCCD1A6NED2 AC104417.2-201ENST00000562989 1793 ntBASIC20.67■□□□□ 0.9
RCCD1A6NED2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
RCCD1A6NED2 AC124283.5-201ENST00000624661 1809 ntBASIC20.67■□□□□ 0.9
RCCD1A6NED2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 WIZP1-201ENST00000531444 2299 ntBASIC20.66■□□□□ 0.9
RCCD1A6NED2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 LSM12P1-201ENST00000411836 588 ntBASIC20.66■□□□□ 0.9
RCCD1A6NED2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 AC005181.1-201ENST00000604782 1256 ntBASIC20.66■□□□□ 0.9
RCCD1A6NED2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RCCD1A6NED2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.66■□□□□ 0.9
RCCD1A6NED2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RCCD1A6NED2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RCCD1A6NED2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.64■□□□□ 0.9
RCCD1A6NED2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.64■□□□□ 0.9
RCCD1A6NED2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.64■□□□□ 0.9
RCCD1A6NED2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RCCD1A6NED2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RCCD1A6NED2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RCCD1A6NED2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
RCCD1A6NED2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.64■□□□□ 0.89
RCCD1A6NED2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RCCD1A6NED2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.64■□□□□ 0.89
RCCD1A6NED2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 AL050303.2-201ENST00000619798 666 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms