Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHISA3A0PJX4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHISA3A0PJX4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.96■□□□□ 0.3
SHISA3A0PJX4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SHISA3A0PJX4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 MYCNOS-205ENST00000641950 531 ntBASIC16.95■□□□□ 0.3
SHISA3A0PJX4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.95■□□□□ 0.3
SHISA3A0PJX4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 HLA-G-202ENST00000376815 851 ntBASIC16.94■□□□□ 0.3
SHISA3A0PJX4 HLA-G-203ENST00000376818 1127 ntBASIC16.94■□□□□ 0.3
SHISA3A0PJX4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
SHISA3A0PJX4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ZNF815P-204ENST00000434898 1737 ntBASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TERF1P5-201ENST00000477545 1207 ntBASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 AC105020.6-201ENST00000621523 1217 ntBASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SHISA3A0PJX4 AC018553.1-201ENST00000616682 1458 ntBASIC16.93■□□□□ 0.3
SHISA3A0PJX4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHISA3A0PJX4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms