Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TCRBV3S1A0A5B6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TCRBV3S1A0A5B6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TCRBV3S1A0A5B6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.21■□□□□ 0.5
TCRBV3S1A0A5B6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 SUDS3P1-201ENST00000505831 966 ntBASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 AL162412.1-201ENST00000567129 965 ntBASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 TERF1P2-201ENST00000583350 1212 ntBASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV3S1A0A5B6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 AC004854.2-201ENST00000608450 1441 ntBASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 IRX1P1-201ENST00000438849 1838 ntBASIC18.19■□□□□ 0.5
TCRBV3S1A0A5B6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV3S1A0A5B6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms