Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 AP003071.4-201ENST00000562276 1284 ntBASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 TCF3P1-201ENST00000423021 1937 ntBASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IGHV4-28A0A0C4DH34 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 KRT8P8-201ENST00000434750 1448 ntBASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC112907.3-201ENST00000577781 2400 ntBASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IGHV4-28A0A0C4DH34 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 NUDT16P1-203ENST00000513809 620 ntBASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 AL355075.4-201ENST00000554988 638 ntBASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 AL445675.2-201ENST00000620291 557 ntBASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.03□□□□□ -0.16
IGHV4-28A0A0C4DH34 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
IGHV4-28A0A0C4DH34 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.02□□□□□ -0.17
IGHV4-28A0A0C4DH34 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms