Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 COX6B1P7-201ENST00000430845 235 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC239367.2-201ENST00000447309 705 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC021146.3-201ENST00000511911 260 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC079587.1-201ENST00000603846 277 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC090948.2-201ENST00000607363 564 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 MIR7151-201ENST00000617477 60 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 MTCO1P7-201ENST00000419523 1542 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 RN7SKP27-201ENST00000410684 333 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 SETP15-201ENST00000412724 337 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC122718.1-201ENST00000439448 744 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 FAM133DP-201ENST00000464802 691 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 RPL21P6-201ENST00000479171 504 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC026979.4-201ENST00000606555 645 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC099654.11-201ENST00000638857 294 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 AC104118.1-201ENST00000607625 1589 ntBASIC3.82□□□□□ -1.8
KIAA1549Q9HCM3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 SPRR2C-201ENST00000290702 219 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AL035696.2-201ENST00000407941 709 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AC012519.1-201ENST00000424588 610 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AL358472.1-201ENST00000431295 329 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AL512326.1-201ENST00000443050 721 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 RPS4XP4-201ENST00000443195 763 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 BTG4P1-201ENST00000510421 183 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 YPEL5P3-201ENST00000547227 352 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 MIR4286-201ENST00000580651 93 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 AC091905.2-201ENST00000623143 306 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.81□□□□□ -1.8
KIAA1549Q9HCM3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 RN7SKP227-201ENST00000364445 330 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 YY1P1-201ENST00000427625 668 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 CEACAMP1-201ENST00000434624 1035 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 RNU1-45P-201ENST00000517191 141 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KIAA1549Q9HCM3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms