Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BNIP3P15-201ENST00000604600 301 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AC008013.3-201ENST00000605711 675 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 NEAT1_3.1-201ENST00000613347 159 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 TCL6_2.1-201ENST00000615162 119 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR6816-201ENST00000620368 66 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AC215522.2-201ENST00000635373 600 ntTSL 3 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR3529-201ENST00000637713 78 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 CACNA2D4-202ENST00000382722 5475 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ANXA7-202ENST00000372921 2452 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 RBFOX1-202ENST00000340209 4099 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ZSCAN5B-201ENST00000358992 1626 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 IDH1-203ENST00000415913 2441 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 NVL-203ENST00000391875 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 C17orf102-201ENST00000623254 3997 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 SCMH1-208ENST00000397171 3186 ntTSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 TPP2-201ENST00000376052 5447 ntTSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AL158212.3-201ENST00000564352 4237 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 TEX28-204ENST00000619903 1549 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AC093831.2-201ENST00000624393 3427 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 WEE2-AS1-209ENST00000488785 2262 ntTSL 2 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 NTRK3-208ENST00000557856 2622 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 DBF4B-201ENST00000315005 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 AL096816.1-201ENST00000623300 2920 ntBASIC5.07□□□□□ -1.6
KRTAP3-3Q9BYR6 OSBPL6-205ENST00000392505 3637 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 KIF3B-201ENST00000375712 6103 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ABCC8-202ENST00000389817 4921 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RRP12-211ENST00000536831 4476 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 SPOCD1-214ENST00000533231 3774 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ZMYND8-220ENST00000617418 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 SOX6-210ENST00000528252 2707 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 CSNK1A1-201ENST00000261798 6067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 MAPK10-329ENST00000641555 2656 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ADAM32-201ENST00000379907 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 WDR93-205ENST00000560294 2293 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 CD300LG-201ENST00000293396 988 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 Y_RNA.467-201ENST00000384297 102 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR562-201ENST00000384894 95 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 MIR137-201ENST00000385223 102 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RNA5SP41-201ENST00000411020 101 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 LINC01703-201ENST00000412855 423 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RPL36P18-201ENST00000419316 318 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AC245291.1-201ENST00000419501 328 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 Z82198.3-201ENST00000421145 199 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AC092017.1-201ENST00000431591 659 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AL357936.1-201ENST00000434375 662 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AL590682.1-201ENST00000437248 344 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AC009238.1-201ENST00000442165 424 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AL590822.1-201ENST00000442483 326 ntTSL 3 BASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 AC009237.6-201ENST00000446969 424 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 KC877373.1-201ENST00000479066 408 ntBASIC5.06□□□□□ -1.6
KRTAP3-3Q9BYR6 IGKV1-17-201ENST00000490686 378 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms