Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC011840.5-201ENST00000582125 771 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC015911.5-201ENST00000587076 451 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX3Q99909 SNORD91B-202ENST00000608459 222 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC244107.2-201ENST00000611773 76 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC090527.3-201ENST00000619041 548 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AC095038.2-201ENST00000621464 1070 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AL356121.2-201ENST00000624715 780 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 AP003400.3-201ENST00000624904 346 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSX3Q99909 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
SSX3Q99909 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX3Q99909 AC092747.4-201ENST00000620519 1861 ntBASIC4.26□□□□□ -1.73
SSX3Q99909 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSX3Q99909 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX3Q99909 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 RNA5SP391-201ENST00000363456 119 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX3Q99909 MIR765-201ENST00000390226 114 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 ATF1P1-201ENST00000406040 927 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 SNORA11B-201ENST00000408175 129 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 VTA1P1-201ENST00000414044 866 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AL158825.1-201ENST00000414735 521 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 TCEA1P4-201ENST00000415066 844 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AL606495.1-201ENST00000422100 813 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX3Q99909 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 GAPDHP58-201ENST00000438477 1006 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 ACTR3P2-201ENST00000439585 1257 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX3Q99909 MOB1AP2-201ENST00000446060 614 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 BTF3P6-201ENST00000448054 499 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX3Q99909 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC009127.1-201ENST00000467090 155 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AC112206.1-201ENST00000468416 477 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AC022133.1-201ENST00000490961 571 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC112518.2-201ENST00000508565 425 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 HMGN1P9-201ENST00000515212 298 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 RN7SKP66-201ENST00000516681 231 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 OR5AK3P-201ENST00000527486 1297 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX3Q99909 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC104229.1-201ENST00000561364 255 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AP000919.1-202ENST00000581139 1264 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX3Q99909 AC009597.2-201ENST00000604659 592 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 MIR8084-201ENST00000614105 89 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 MIR7155-201ENST00000615925 56 ntBASIC4.25□□□□□ -1.73
SSX3Q99909 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX3Q99909 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX3Q99909 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
SSX3Q99909 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX3Q99909 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX3Q99909 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 AC100871.1-201ENST00000507871 1456 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SSX3Q99909 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 IL6STP1-201ENST00000346911 1020 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX3Q99909 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX3Q99909 GCNT6-201ENST00000379591 934 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 OR8V1P-201ENST00000395193 873 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 U3.36-201ENST00000408418 213 ntBASIC4.24□□□□□ -1.73
SSX3Q99909 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSX3Q99909 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX3Q99909 AC004987.3-201ENST00000413879 771 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms