Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPS6P15-201ENST00000431996 751 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 PPIAP13-201ENST00000434706 478 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC009220.1-201ENST00000451614 275 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AC243772.1-201ENST00000451620 410 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AZGP1P2-201ENST00000454506 345 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 RPS29P22-201ENST00000472363 168 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AC015724.1-201ENST00000478577 156 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AP000563.1-201ENST00000490865 758 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 RN7SKP283-201ENST00000517197 270 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 DUXAP6-201ENST00000553858 601 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNGA1P29973 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CNGA1P29973 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 AC095055.1-201ENST00000603472 1113 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
CNGA1P29973 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 TTC39DP-201ENST00000416781 1688 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.16□□□□□ -1.42
CNGA1P29973 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.16□□□□□ -1.42
CNGA1P29973 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.16□□□□□ -1.42
CNGA1P29973 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CNGA1P29973 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 AC068870.1-201ENST00000563737 2455 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 SNORA17.1-201ENST00000362945 126 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 RNU6-83P-201ENST00000384568 112 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 RNY3P9-201ENST00000384727 106 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 OR4K12P-201ENST00000406538 961 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC016397.1-201ENST00000412463 242 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC073648.4-201ENST00000442655 781 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 AL596266.1-201ENST00000448132 400 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 RPS3AP41-201ENST00000462701 778 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC009127.1-201ENST00000467090 155 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC011979.1-201ENST00000472300 483 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.42
CNGA1P29973 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 HMGB1P44-201ENST00000508597 572 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.15□□□□□ -1.42
CNGA1P29973 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CNGA1P29973 GAPDHP62-201ENST00000515313 990 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 RN7SKP253-201ENST00000516424 309 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 RNU5A-4P-201ENST00000516588 111 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.15□□□□□ -1.42
CNGA1P29973 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.15□□□□□ -1.42
CNGA1P29973 PMS2P3-207ENST00000529061 717 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.15□□□□□ -1.42
CNGA1P29973 ZNF321P-202ENST00000550843 495 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 PCNPP1-201ENST00000552501 511 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.15□□□□□ -1.42
CNGA1P29973 AC021171.1-201ENST00000603137 706 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AC009027.1-201ENST00000604510 479 ntBASIC6.15□□□□□ -1.42
CNGA1P29973 AL022394.1-201ENST00000606979 292 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms