Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.84□□□□□ -2.12
USH2AO75445 AC006960.3-201ENST00000561845 705 ntBASIC1.84□□□□□ -2.12
USH2AO75445 MIR5680-201ENST00000577577 84 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC114878.2-201ENST00000604863 1251 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC1.84□□□□□ -2.12
USH2AO75445 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
USH2AO75445 AL035425.3-201ENST00000564206 4996 ntBASIC1.84□□□□□ -2.12
USH2AO75445 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
USH2AO75445 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
USH2AO75445 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC1.84□□□□□ -2.12
USH2AO75445 RNA5SP307-201ENST00000362863 116 ntBASIC1.84□□□□□ -2.12
USH2AO75445 MTND2P15-201ENST00000418575 892 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC127537.2-201ENST00000439258 465 ntBASIC1.84□□□□□ -2.12
USH2AO75445 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC1.84□□□□□ -2.12
USH2AO75445 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.84□□□□□ -2.12
USH2AO75445 AC092691.2-201ENST00000461787 803 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC1.84□□□□□ -2.12
USH2AO75445 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC1.84□□□□□ -2.12
USH2AO75445 VN1R78P-201ENST00000597393 564 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC091167.4-201ENST00000605079 184 ntBASIC1.84□□□□□ -2.12
USH2AO75445 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.84□□□□□ -2.12
USH2AO75445 AC138932.5-201ENST00000617759 563 ntBASIC1.84□□□□□ -2.12
USH2AO75445 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
USH2AO75445 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 AC097461.1-201ENST00000568928 2821 ntBASIC1.83□□□□□ -2.12
USH2AO75445 LINC00561-201ENST00000565815 2738 ntBASIC1.83□□□□□ -2.12
USH2AO75445 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
USH2AO75445 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 MIR887-201ENST00000401258 79 ntBASIC1.83□□□□□ -2.12
USH2AO75445 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 AC073387.1-201ENST00000453261 709 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AL133162.1-201ENST00000463228 453 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 AC135507.2-201ENST00000612443 309 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC005618.4-201ENST00000625053 554 ntBASIC1.83□□□□□ -2.12
USH2AO75445 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
USH2AO75445 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 FAP-203ENST00000443424 2598 ntTSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 AL117339.4-201ENST00000608335 7063 ntBASIC1.83□□□□□ -2.12
USH2AO75445 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 AC068769.1-201ENST00000474767 2426 ntBASIC1.83□□□□□ -2.12
USH2AO75445 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 U1.1-201ENST00000384101 164 ntBASIC1.83□□□□□ -2.12
USH2AO75445 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 AC010095.1-201ENST00000443543 144 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 ALB-202ENST00000401494 1659 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 ASNSP3-201ENST00000451989 1306 ntBASIC1.83□□□□□ -2.12
USH2AO75445 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USH2AO75445 MFSD8-242ENST00000641690 4199 ntBASIC1.83□□□□□ -2.12
USH2AO75445 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 DOCK11P1-201ENST00000553480 5932 ntBASIC1.83□□□□□ -2.12
USH2AO75445 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
USH2AO75445 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
USH2AO75445 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.83□□□□□ -2.12
USH2AO75445 RPS7P15-201ENST00000415804 584 ntBASIC1.83□□□□□ -2.12
USH2AO75445 MAP1LC3BP1-201ENST00000417653 379 ntBASIC1.83□□□□□ -2.12
USH2AO75445 AC092162.1-201ENST00000432828 434 ntBASIC1.83□□□□□ -2.12
USH2AO75445 Z74696.2-201ENST00000436514 498 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms