Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MEMO1P5-201ENST00000604810 406 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC055876.5-201ENST00000605667 259 ntBASIC6.54□□□□□ -1.36
SOX1O00570 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 AL445264.1-201ENST00000621719 171 ntBASIC6.54□□□□□ -1.36
SOX1O00570 MKKS-204ENST00000639674 192 ntBASIC6.54□□□□□ -1.36
SOX1O00570 AC119674.1-212ENST00000641155 993 ntBASIC6.54□□□□□ -1.36
SOX1O00570 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SOX1O00570 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
SOX1O00570 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.54□□□□□ -1.36
SOX1O00570 AC010401.2-201ENST00000575137 4934 ntBASIC6.53□□□□□ -1.36
SOX1O00570 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.53□□□□□ -1.36
SOX1O00570 OR5BR1P-201ENST00000524992 1330 ntBASIC6.53□□□□□ -1.36
SOX1O00570 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SOX1O00570 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SOX1O00570 RNU4-73P-201ENST00000363164 141 ntBASIC6.53□□□□□ -1.36
SOX1O00570 SNORA63-201ENST00000363450 132 ntBASIC6.53□□□□□ -1.36
SOX1O00570 RNU6-666P-201ENST00000363499 107 ntBASIC6.53□□□□□ -1.36
SOX1O00570 Y_RNA.162-201ENST00000363683 102 ntBASIC6.53□□□□□ -1.36
SOX1O00570 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 RNU6-98P-201ENST00000384173 107 ntBASIC6.53□□□□□ -1.36
SOX1O00570 SNRPEP6-201ENST00000407465 277 ntBASIC6.53□□□□□ -1.36
SOX1O00570 HMGB1P11-201ENST00000413899 637 ntBASIC6.53□□□□□ -1.36
SOX1O00570 C1DP2-201ENST00000418167 426 ntBASIC6.53□□□□□ -1.36
SOX1O00570 SDCBPP3-201ENST00000419629 891 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.53□□□□□ -1.36
SOX1O00570 FTH1P10-202ENST00000430907 550 ntBASIC6.53□□□□□ -1.36
SOX1O00570 RPL37P21-201ENST00000435890 276 ntBASIC6.53□□□□□ -1.36
SOX1O00570 LDHAP2-201ENST00000437325 985 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.53□□□□□ -1.36
SOX1O00570 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.53□□□□□ -1.36
SOX1O00570 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 OR7E116P-201ENST00000448529 957 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.53□□□□□ -1.36
SOX1O00570 AC108463.1-201ENST00000450258 347 ntBASIC6.53□□□□□ -1.36
SOX1O00570 PMCHL2-203ENST00000457791 237 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC112206.1-201ENST00000468416 477 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC055733.3-201ENST00000505214 523 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.53□□□□□ -1.36
SOX1O00570 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.53□□□□□ -1.36
SOX1O00570 AC018710.1-201ENST00000506509 158 ntBASIC6.53□□□□□ -1.36
SOX1O00570 MTCO3P9-201ENST00000506989 781 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.53□□□□□ -1.36
SOX1O00570 SNORA18.6-201ENST00000516792 115 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.53□□□□□ -1.36
SOX1O00570 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.53□□□□□ -1.36
SOX1O00570 BNIP3P11-201ENST00000603878 563 ntBASIC6.53□□□□□ -1.36
SOX1O00570 SUGT1P3-202ENST00000604259 383 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC010200.2-201ENST00000605098 235 ntBASIC6.53□□□□□ -1.36
SOX1O00570 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 AC009233.1-201ENST00000616477 371 ntBASIC6.53□□□□□ -1.36
SOX1O00570 MIR7159-201ENST00000620587 66 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC093591.3-201ENST00000634516 308 ntBASIC6.53□□□□□ -1.36
SOX1O00570 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SOX1O00570 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
SOX1O00570 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SOX1O00570 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 LCOR-201ENST00000286067 4542 ntBASIC6.53□□□□□ -1.36
SOX1O00570 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SOX1O00570 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.53□□□□□ -1.36
SOX1O00570 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.53□□□□□ -1.36
SOX1O00570 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.53□□□□□ -1.36
SOX1O00570 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC6.52□□□□□ -1.36
SOX1O00570 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SOX1O00570 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SOX1O00570 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.52□□□□□ -1.37
SOX1O00570 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SOX1O00570 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.52□□□□□ -1.37
SOX1O00570 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms