Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 Y_RNA.1-201ENST00000352915 104 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 MIR548M-201ENST00000408260 86 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC007563.3-201ENST00000433233 371 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 HMGB1P45-201ENST00000435986 653 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 NXT1P1-201ENST00000458481 316 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RPS4XP12-201ENST00000461747 709 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RN7SL382P-201ENST00000482631 282 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 IGKV3D-25-201ENST00000519599 235 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 BRD9P1-201ENST00000529855 560 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 MYL12BP1-201ENST00000569826 507 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC008507.3-201ENST00000585753 472 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AL450226.2-201ENST00000622913 439 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC040168.1-201ENST00000623594 991 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 AC012078.1-201ENST00000405035 1646 ntBASIC7.56□□□□□ -1.2
TRIM47Q96LD4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TRIM47Q96LD4 RACGAP1P-201ENST00000550663 1879 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC016251.2-201ENST00000623393 3089 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RNU6-549P-201ENST00000384433 107 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 TXNP7-201ENST00000406296 293 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RNU6-908P-201ENST00000410160 94 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC019050.1-201ENST00000418508 492 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 B3GALNT1P1-201ENST00000420569 975 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC007435.1-201ENST00000421086 415 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AL389915.1-201ENST00000422463 466 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RPL7P12-201ENST00000446719 750 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 HLA-DPA3-207ENST00000454398 229 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC073594.1-201ENST00000462065 364 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 PPIAP19-201ENST00000486414 492 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RPS4XP14-201ENST00000493072 781 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC063943.2-201ENST00000495697 534 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC008945.1-201ENST00000505144 499 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC026412.2-201ENST00000512270 1075 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC079905.1-201ENST00000549280 475 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AL162632.2-201ENST00000553933 399 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 RN7SL404P-201ENST00000582421 281 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AL162413.1-201ENST00000603198 110 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AC024560.3-201ENST00000608482 349 ntBASIC7.55□□□□□ -1.2
TRIM47Q96LD4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.55□□□□□ -1.2
TRIM47Q96LD4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms