Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MTND3P7-201ENST00000474435 343 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 NENFP3-201ENST00000503735 313 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC111000.2-201ENST00000507775 550 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC008837.2-201ENST00000513076 418 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC117532.1-201ENST00000514638 323 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 RNU6-416P-201ENST00000516265 103 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 MTCO1P49-201ENST00000523429 802 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 DPPA2P4-201ENST00000563717 878 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 MTCYBP13-201ENST00000578634 1093 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 PRPF19P1-201ENST00000584766 898 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC079248.2-201ENST00000623779 326 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC092608.3-201ENST00000625017 386 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC073869.8-201ENST00000641806 335 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 MRE11P1-201ENST00000464884 2127 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC004817.4-201ENST00000602396 3625 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AL450345.1-202ENST00000605741 3881 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 AC007996.1-201ENST00000620414 2821 ntBASIC5□□□□□ -1.61
PTCHD4Q6ZW05 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PTCHD4Q6ZW05 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC104118.1-201ENST00000607625 1589 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 PCAT14-202ENST00000627127 3935 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 IGKV7-3-201ENST00000357453 298 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 OR7E156P-201ENST00000400303 464 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 COX5BP7-201ENST00000414780 274 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC066692.1-201ENST00000421721 457 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 GTF2IP23-201ENST00000423746 351 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC127526.2-201ENST00000426436 775 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 TMX2P1-201ENST00000436507 708 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC006335.2-201ENST00000437993 330 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 HMGB1P16-201ENST00000447155 540 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC073387.1-201ENST00000453261 709 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 MTND2P28-201ENST00000457540 1044 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC022215.1-201ENST00000481770 362 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 OR2A20P-203ENST00000498397 1268 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC021146.8-201ENST00000507455 733 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 EIF3KP3-201ENST00000514461 639 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 SCARNA20.4-201ENST00000516969 131 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 HMGB1P23-201ENST00000518743 568 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC002400.1-201ENST00000569310 726 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 MIR4666A-201ENST00000580160 79 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AP005262.1-201ENST00000582646 997 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 VN1R88P-201ENST00000596787 292 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC106791.2-201ENST00000604680 391 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC105129.3-201ENST00000605455 485 ntBASIC4.99□□□□□ -1.61
PTCHD4Q6ZW05 AC124312.4-201ENST00000605533 310 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms