Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AL513548.1-201ENST00000562904 1724 ntBASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 PRELID3BP10-201ENST00000431957 584 ntBASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 AL929601.4-201ENST00000613011 1341 ntBASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDC42BPAQ5VT25 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 RN7SKP186-201ENST00000365371 303 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 AC104306.1-201ENST00000449702 371 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 FCF1P7-201ENST00000451185 558 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 OR5D2P-201ENST00000524390 911 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 CYCSP28-201ENST00000534284 321 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 AL354798.1-201ENST00000622505 329 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 AC009093.8-201ENST00000641769 292 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDC42BPAQ5VT25 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 TCEA1P4-201ENST00000415066 844 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 HMGN2P27-201ENST00000427352 270 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 SCARNA14-201ENST00000516903 136 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 SNORA51-201ENST00000606420 132 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AL049781.1-201ENST00000623195 3585 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 ZNF285B-201ENST00000561698 1767 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AL627171.1-201ENST00000618845 1308 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC007066.1-201ENST00000392902 381 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 HMGB3P19-201ENST00000403971 560 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 RAB9AP3-201ENST00000412737 573 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 RAB9AP1-201ENST00000449393 573 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 SETP4-201ENST00000455717 868 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 AC009852.2-201ENST00000567898 485 ntBASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.22□□□□□ -1.41
CDC42BPAQ5VT25 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDC42BPAQ5VT25 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC068533.1-201ENST00000418542 415 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 RPS3AP6-201ENST00000484430 795 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 RPL29P14-201ENST00000495837 428 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 RN7SKP157-201ENST00000516174 282 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 MIR6868-201ENST00000611215 58 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC012314.7-201ENST00000619693 93 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC022106.2-201ENST00000620114 757 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 AL672167.1-203ENST00000641299 2975 ntBASIC6.21□□□□□ -1.42
CDC42BPAQ5VT25 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDC42BPAQ5VT25 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDC42BPAQ5VT25 AC021242.1-201ENST00000507315 2035 ntBASIC6.2□□□□□ -1.42
CDC42BPAQ5VT25 CASC19-284ENST00000642142 1868 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms