Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC006927.4-201ENST00000639187 543 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.11□□□□□ -1.59
PTPN9P43378 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTPN9P43378 AC099654.2-201ENST00000433031 1980 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTPN9P43378 INTS6P1-201ENST00000504674 2530 ntBASIC5.11□□□□□ -1.59
PTPN9P43378 SMG1P6-201ENST00000532337 2930 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 MIR105-2-201ENST00000385083 81 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 CHEK2P3-201ENST00000416118 248 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 HSFY3P-201ENST00000444242 1191 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 RN7SL808P-201ENST00000496066 299 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.1□□□□□ -1.59
PTPN9P43378 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN9P43378 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.1□□□□□ -1.59
PTPN9P43378 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.1□□□□□ -1.59
PTPN9P43378 AC034205.1-201ENST00000520621 638 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 OR5AZ1P-201ENST00000527448 943 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 OR5AK3P-201ENST00000527486 1297 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.1□□□□□ -1.59
PTPN9P43378 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.1□□□□□ -1.59
PTPN9P43378 NPM1P35-201ENST00000533043 868 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN9P43378 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.1□□□□□ -1.59
PTPN9P43378 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.1□□□□□ -1.59
PTPN9P43378 CYCSP40-201ENST00000575927 294 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 MIR4789-201ENST00000577469 82 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 AL606537.1-201ENST00000607258 2011 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 AL121890.3-201ENST00000618494 516 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 AC073569.3-201ENST00000619055 682 ntBASIC5.1□□□□□ -1.59
PTPN9P43378 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PTPN9P43378 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTPN9P43378 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTPN9P43378 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN9P43378 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTPN9P43378 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 RNA5SP123-201ENST00000363244 119 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTPN9P43378 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.09□□□□□ -1.59
PTPN9P43378 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 VTA1P1-201ENST00000414044 866 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 MTATP6P20-201ENST00000414147 562 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN9P43378 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 CYCSP11-201ENST00000436426 315 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 NPM1P33-201ENST00000438918 872 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 AL353093.1-201ENST00000441292 436 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN9P43378 GAPDHP56-201ENST00000506031 988 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC110775.1-201ENST00000513721 462 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 RNA5SP249-201ENST00000516127 99 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC091163.3-201ENST00000518269 1144 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN9P43378 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTPN9P43378 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN9P43378 GCSHP4-201ENST00000538792 439 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC008033.2-201ENST00000542626 177 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.09□□□□□ -1.59
PTPN9P43378 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.09□□□□□ -1.59
PTPN9P43378 SNORA74C-1-201ENST00000580726 201 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 AC020910.3-201ENST00000603701 874 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC013244.1-201ENST00000604279 193 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 MIR7155-201ENST00000615925 56 ntBASIC5.09□□□□□ -1.59
PTPN9P43378 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PTPN9P43378 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.09□□□□□ -1.59
PTPN9P43378 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN9P43378 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.09□□□□□ -1.59
PTPN9P43378 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTPN9P43378 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms