Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 FKBP1BP1-201ENST00000553366 325 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC5.41□□□□□ -1.54
CIITAP33076 AC105129.1-201ENST00000560250 297 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.41□□□□□ -1.54
CIITAP33076 AC005034.4-201ENST00000603612 899 ntBASIC5.41□□□□□ -1.54
CIITAP33076 DUXAP10-204ENST00000612052 616 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AL356274.1-201ENST00000617064 410 ntBASIC5.41□□□□□ -1.54
CIITAP33076 MIR6853-201ENST00000619642 74 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC012414.7-202ENST00000622705 1090 ntBASIC5.41□□□□□ -1.54
CIITAP33076 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CIITAP33076 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 SOCS5P3-201ENST00000425115 1576 ntBASIC5.41□□□□□ -1.54
CIITAP33076 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 AL442639.1-201ENST00000625030 1899 ntBASIC5.41□□□□□ -1.54
CIITAP33076 CASC19-284ENST00000642142 1868 ntBASIC5.41□□□□□ -1.54
CIITAP33076 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 MFSD8-216ENST00000641147 4009 ntBASIC5.4□□□□□ -1.54
CIITAP33076 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 RNU5E-10P-201ENST00000363506 118 ntBASIC5.4□□□□□ -1.54
CIITAP33076 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.4□□□□□ -1.54
CIITAP33076 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 MIR585-201ENST00000384887 94 ntBASIC5.4□□□□□ -1.54
CIITAP33076 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 RNA5SP296-201ENST00000410523 111 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 SSR1P2-201ENST00000415208 787 ntBASIC5.4□□□□□ -1.54
CIITAP33076 EIF4HP2-201ENST00000424380 563 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.4□□□□□ -1.54
CIITAP33076 RPL23AP23-201ENST00000452590 471 ntBASIC5.4□□□□□ -1.54
CIITAP33076 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 OR5H3P-201ENST00000502817 919 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC073358.1-201ENST00000505671 684 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.4□□□□□ -1.54
CIITAP33076 AC108120.2-201ENST00000512973 294 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC018442.3-201ENST00000523025 183 ntBASIC5.4□□□□□ -1.54
CIITAP33076 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 AL110118.1-201ENST00000553543 400 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.4□□□□□ -1.54
CIITAP33076 AC025918.2-201ENST00000558683 763 ntBASIC5.4□□□□□ -1.54
CIITAP33076 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CIITAP33076 CYCSP40-201ENST00000575927 294 ntBASIC5.4□□□□□ -1.54
CIITAP33076 RN7SL690P-201ENST00000582087 240 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.4□□□□□ -1.54
CIITAP33076 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.4□□□□□ -1.54
CIITAP33076 AC098935.2-201ENST00000604222 466 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AL445435.1-201ENST00000604232 665 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC124016.2-201ENST00000610058 665 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC015914.2-201ENST00000618167 288 ntBASIC5.4□□□□□ -1.54
CIITAP33076 AC021106.3-201ENST00000623925 531 ntBASIC5.4□□□□□ -1.54
CIITAP33076 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.4□□□□□ -1.54
CIITAP33076 OR5AC4P-202ENST00000642086 985 ntBASIC5.4□□□□□ -1.54
CIITAP33076 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CIITAP33076 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.4□□□□□ -1.55
CIITAP33076 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.4□□□□□ -1.55
CIITAP33076 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CIITAP33076 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CIITAP33076 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CIITAP33076 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CIITAP33076 THAP12P5-201ENST00000405864 2275 ntBASIC5.4□□□□□ -1.55
CIITAP33076 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CIITAP33076 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CIITAP33076 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CIITAP33076 AC026523.2-201ENST00000625039 7739 ntBASIC5.4□□□□□ -1.55
CIITAP33076 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 RNU6-252P-201ENST00000363232 107 ntBASIC5.39□□□□□ -1.55
CIITAP33076 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CIITAP33076 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 AL158825.1-201ENST00000414735 521 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AL590139.1-201ENST00000416267 400 ntBASIC5.39□□□□□ -1.55
CIITAP33076 VPS26BP1-201ENST00000417155 755 ntBASIC5.39□□□□□ -1.55
CIITAP33076 RPA2P2-201ENST00000419698 796 ntBASIC5.39□□□□□ -1.55
CIITAP33076 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CIITAP33076 AC006065.1-201ENST00000422539 802 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AC022022.1-201ENST00000430304 178 ntBASIC5.39□□□□□ -1.55
CIITAP33076 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.39□□□□□ -1.55
CIITAP33076 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms