Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL358934.1-201ENST00000432346 324 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RPL35P8-201ENST00000433284 337 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC000362.1-201ENST00000433725 425 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC003989.1-201ENST00000434569 565 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 MTATP6P23-201ENST00000440153 476 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RBMX2P4-201ENST00000441256 376 ntBASIC5.68□□□□□ -1.5
ATF4P18848 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 RN7SL36P-201ENST00000469345 276 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC040975.1-201ENST00000472104 316 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC087385.1-201ENST00000475062 312 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AP002884.1-201ENST00000479691 655 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC079944.1-201ENST00000485426 495 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.68□□□□□ -1.5
ATF4P18848 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.68□□□□□ -1.5
ATF4P18848 AC138517.1-201ENST00000515724 568 ntBASIC5.68□□□□□ -1.5
ATF4P18848 OR4C1P-201ENST00000530880 937 ntBASIC5.68□□□□□ -1.5
ATF4P18848 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.68□□□□□ -1.5
ATF4P18848 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AC002519.2-203ENST00000567043 837 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC068135.2-201ENST00000569293 1028 ntBASIC5.68□□□□□ -1.5
ATF4P18848 MIR5705-201ENST00000579870 89 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 AC090241.1-201ENST00000587732 621 ntBASIC5.68□□□□□ -1.5
ATF4P18848 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AC103724.4-201ENST00000605981 292 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AL590282.1-201ENST00000610379 1136 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 AC009159.1-201ENST00000618386 642 ntBASIC5.68□□□□□ -1.5
ATF4P18848 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC5.68□□□□□ -1.5
ATF4P18848 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.68□□□□□ -1.5
ATF4P18848 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.68□□□□□ -1.5
ATF4P18848 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AC025574.1-201ENST00000554784 1653 ntBASIC5.68□□□□□ -1.5
ATF4P18848 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 ZNF734P-201ENST00000419494 1534 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC027088.4-201ENST00000611559 1947 ntBASIC5.68□□□□□ -1.5
ATF4P18848 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AC022325.1-201ENST00000502748 2199 ntBASIC5.67□□□□□ -1.5
ATF4P18848 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 AC100810.3-201ENST00000633189 2240 ntBASIC5.67□□□□□ -1.5
ATF4P18848 BCORP1-203ENST00000513194 5093 ntBASIC5.67□□□□□ -1.5
ATF4P18848 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 AC093278.2-201ENST00000564956 2485 ntBASIC5.67□□□□□ -1.5
ATF4P18848 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC5.67□□□□□ -1.5
ATF4P18848 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AC006484.1-201ENST00000435086 1884 ntBASIC5.67□□□□□ -1.5
ATF4P18848 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 RNU1-59P-201ENST00000364829 162 ntBASIC5.67□□□□□ -1.5
ATF4P18848 RNU6-1283P-201ENST00000365314 105 ntBASIC5.67□□□□□ -1.5
ATF4P18848 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATF4P18848 MTCO3P40-201ENST00000392516 676 ntBASIC5.67□□□□□ -1.5
ATF4P18848 KRT18P52-201ENST00000404956 846 ntBASIC5.67□□□□□ -1.5
ATF4P18848 CIR1P3-201ENST00000405137 479 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL590002.1-201ENST00000406554 418 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC004987.3-201ENST00000413879 771 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AC093107.1-201ENST00000422772 609 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 USP9YP36-201ENST00000424581 829 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.67□□□□□ -1.5
ATF4P18848 AL136231.1-201ENST00000429407 730 ntBASIC5.67□□□□□ -1.5
ATF4P18848 PSMA2P3-201ENST00000429685 675 ntBASIC5.67□□□□□ -1.5
ATF4P18848 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATF4P18848 AL592114.2-201ENST00000440142 532 ntBASIC5.67□□□□□ -1.5
ATF4P18848 IGKV1OR2-2-201ENST00000451163 355 ntBASIC5.67□□□□□ -1.5
ATF4P18848 PRPF38AP1-201ENST00000451976 933 ntBASIC5.67□□□□□ -1.5
ATF4P18848 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.67□□□□□ -1.5
ATF4P18848 RPL10P6-201ENST00000457497 318 ntBASIC5.67□□□□□ -1.5
ATF4P18848 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.67□□□□□ -1.5
ATF4P18848 RPS14P8-201ENST00000478778 369 ntBASIC5.67□□□□□ -1.5
ATF4P18848 RN7SL335P-201ENST00000482790 304 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms