Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RB1P06400 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 CCT8P1-201ENST00000413611 1657 ntBASIC5.17□□□□□ -1.58
RB1P06400 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
RB1P06400 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 AC120338.1-201ENST00000625074 1541 ntBASIC5.17□□□□□ -1.58
RB1P06400 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.17□□□□□ -1.58
RB1P06400 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RB1P06400 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
RB1P06400 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 MTCO1P4-201ENST00000520516 1409 ntBASIC5.16□□□□□ -1.58
RB1P06400 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 MIR16-2-201ENST00000362117 81 ntBASIC5.16□□□□□ -1.58
RB1P06400 RNA5SP388-201ENST00000362584 119 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC007618.1-201ENST00000366455 732 ntBASIC5.16□□□□□ -1.58
RB1P06400 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.16□□□□□ -1.58
RB1P06400 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.16□□□□□ -1.58
RB1P06400 RPL34P26-201ENST00000445636 354 ntBASIC5.16□□□□□ -1.58
RB1P06400 CASP3P1-201ENST00000446037 609 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC000111.2-201ENST00000448200 210 ntBASIC5.16□□□□□ -1.58
RB1P06400 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 RNU7-27P-201ENST00000459281 62 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC091153.1-201ENST00000466297 402 ntBASIC5.16□□□□□ -1.58
RB1P06400 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RB1P06400 RN7SL41P-201ENST00000476144 297 ntBASIC5.16□□□□□ -1.58
RB1P06400 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 AC016550.1-201ENST00000505348 785 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC073358.1-201ENST00000505671 684 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC093824.1-201ENST00000508796 343 ntBASIC5.16□□□□□ -1.58
RB1P06400 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 RN7SL802P-201ENST00000577858 299 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.16□□□□□ -1.58
RB1P06400 AC069061.3-201ENST00000582254 823 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.16□□□□□ -1.58
RB1P06400 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 AL391834.1-201ENST00000609609 560 ntBASIC5.16□□□□□ -1.58
RB1P06400 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.16□□□□□ -1.58
RB1P06400 AC007342.8-201ENST00000623278 678 ntBASIC5.16□□□□□ -1.58
RB1P06400 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RB1P06400 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RB1P06400 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.16□□□□□ -1.58
RB1P06400 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
RB1P06400 AP001029.2-203ENST00000589795 4910 ntBASIC5.15□□□□□ -1.58
RB1P06400 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RB1P06400 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RB1P06400 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RB1P06400 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RB1P06400 MUC2-202ENST00000613187 4845 ntBASIC5.15□□□□□ -1.58
RB1P06400 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 SNORA63.3-201ENST00000362682 132 ntBASIC5.15□□□□□ -1.59
RB1P06400 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 BMS1P3-201ENST00000372011 932 ntBASIC5.15□□□□□ -1.59
RB1P06400 RNU6-452P-201ENST00000384406 107 ntBASIC5.15□□□□□ -1.59
RB1P06400 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RB1P06400 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RB1P06400 AL158825.1-201ENST00000414735 521 ntBASIC5.15□□□□□ -1.59
RB1P06400 UQCRBP1-201ENST00000421129 336 ntBASIC5.15□□□□□ -1.59
RB1P06400 MTCO2P1-201ENST00000424648 477 ntBASIC5.15□□□□□ -1.59
RB1P06400 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 AC239367.2-201ENST00000447309 705 ntBASIC5.15□□□□□ -1.59
RB1P06400 RPL7AP52-201ENST00000458096 790 ntBASIC5.15□□□□□ -1.59
RB1P06400 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 AC092902.1-201ENST00000486999 259 ntBASIC5.15□□□□□ -1.59
RB1P06400 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 AC108471.1-201ENST00000513977 287 ntBASIC5.15□□□□□ -1.59
RB1P06400 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.15□□□□□ -1.59
RB1P06400 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 SETP1-201ENST00000556014 845 ntBASIC5.15□□□□□ -1.59
RB1P06400 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.15□□□□□ -1.59
RB1P06400 RN7SL290P-201ENST00000578661 300 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms