Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC009101.2-202ENST00000564851 490 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC091932.1-201ENST00000569381 427 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 ACP5-208ENST00000590420 301 ntTSL 5 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC005498.1-201ENST00000592125 465 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC022239.4-201ENST00000602626 504 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 SLC25A6P5-202ENST00000602729 1038 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.6-201ENST00000603753 252 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.11-201ENST00000604059 253 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC008162.1-201ENST00000604718 254 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.1-201ENST00000604752 252 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.5-201ENST00000605253 252 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.12-201ENST00000605291 253 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.8-201ENST00000605353 252 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AL670379.7-201ENST00000605823 252 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 FLT1-208ENST00000617835 434 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 BDP1P-201ENST00000582658 1990 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 ASPH-207ENST00000517847 1947 ntTSL 5 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 ASNSP1-201ENST00000518311 1939 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC8.91□□□□□ -0.98
RTN4Q9NQC3 AC011493.1-201ENST00000596753 1632 ntBASIC8.91□□□□□ -0.98
RTN4Q9NQC3 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RNA5SP336-201ENST00000364189 117 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RNU4-66P-201ENST00000365199 138 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 SMCP-201ENST00000368765 775 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RNU6-903P-201ENST00000391270 109 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL133260.1-201ENST00000405720 405 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RNU2-47P-201ENST00000410649 186 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CALM2P2-201ENST00000428512 440 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC007683.1-201ENST00000432746 591 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 HMGB3P9-201ENST00000441799 583 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC007677.1-201ENST00000445757 515 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 LINC00265-202ENST00000448955 468 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 IGHV5-78-201ENST00000450948 295 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL450023.2-201ENST00000453276 545 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC096922.1-201ENST00000461635 651 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 HMGB1P25-201ENST00000468402 607 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC004453.1-201ENST00000487895 408 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC079594.1-201ENST00000489757 331 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC084871.2-201ENST00000503355 464 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 RN7SKP99-201ENST00000517028 307 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 IGLV7-35-201ENST00000523314 340 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 PSMA2P1-201ENST00000526365 646 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 MIR4703-201ENST00000577728 79 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CSAG4-202ENST00000583763 237 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL513218.1-201ENST00000606527 391 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AL050343.2-201ENST00000607338 280 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC002059.1-201ENST00000608014 477 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC016876.3-201ENST00000610459 426 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 AC055839.1-201ENST00000634467 498 ntBASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
RTN4Q9NQC3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RTN4Q9NQC3 AC005224.3-201ENST00000584683 2140 ntBASIC8.9□□□□□ -0.99
RTN4Q9NQC3 KARSP2-201ENST00000415696 1639 ntBASIC8.9□□□□□ -0.99
RTN4Q9NQC3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
RTN4Q9NQC3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RTN4Q9NQC3 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RTN4Q9NQC3 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
RTN4Q9NQC3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AL139811.1-201ENST00000424779 2299 ntBASIC8.89□□□□□ -0.99
RTN4Q9NQC3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC8.89□□□□□ -0.99
RTN4Q9NQC3 AL080312.1-201ENST00000256654 824 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms