Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
C9orf40Q8IXQ3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC00622-201ENST00000562811 1570 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 IL6STP1-201ENST00000346911 1020 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 RNU1-94P-201ENST00000362627 173 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 MIR921-201ENST00000401133 56 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 RNA5SP146-201ENST00000410743 123 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 RAD23BP1-201ENST00000421404 1227 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 SETP10-201ENST00000424368 814 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 CNOT7P1-201ENST00000429006 852 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 MTND5P8-201ENST00000449817 1083 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 RPL7AP28-201ENST00000464513 571 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC006463.2-201ENST00000473326 348 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC021087.2-201ENST00000504656 1203 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 COL6A4P2-205ENST00000509855 506 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 MIR5096-201ENST00000583713 70 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC091178.1-203ENST00000584586 279 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AP004372.1-201ENST00000604842 844 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC020634.1-201ENST00000608701 549 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 OR2L1P-202ENST00000641567 1023 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 LINC01808-202ENST00000641680 1116 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 OR5AC4P-202ENST00000642086 985 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 A2MP1-204ENST00000566278 4130 ntBASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
C9orf40Q8IXQ3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 SNORA79B-201ENST00000410557 148 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AL807761.1-201ENST00000417622 171 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 BTF3P9-201ENST00000418784 283 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RPS27AP7-201ENST00000422792 455 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RPL21P91-201ENST00000429231 479 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AC093716.1-201ENST00000435923 377 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 MTCYBP29-201ENST00000436327 1006 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AL691517.1-201ENST00000440833 1235 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RPL23AP43-201ENST00000446445 471 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 MTND2P28-201ENST00000457540 1044 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 snoU13.1-201ENST00000459157 104 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 RPL21P126-201ENST00000470049 478 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AC021146.3-201ENST00000511911 260 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AC034244.2-201ENST00000514668 858 ntBASIC4.18□□□□□ -1.74
C9orf40Q8IXQ3 AP000827.1-201ENST00000527814 258 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms