Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFWD3Q6PCD5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFWD3Q6PCD5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.71□□□□□ -1.66
RFWD3Q6PCD5 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
RFWD3Q6PCD5 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 EOGT-210ENST00000615922 1931 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 HSPA8P17-201ENST00000427029 1382 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 RNU6-1331P-201ENST00000363658 106 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 RPS24P12-201ENST00000402084 394 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL732292.1-201ENST00000426692 226 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AP001324.1-201ENST00000428553 399 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL392003.1-201ENST00000434394 243 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 MTND6P18-201ENST00000439477 513 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 MTND2P3-201ENST00000452458 470 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 C1DP3-201ENST00000455013 423 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AC068831.4-201ENST00000556118 109 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 MIR4277-201ENST00000578298 84 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 SLC25A36P1-201ENST00000590111 465 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 FAM60CP-201ENST00000591086 664 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL023583.1-201ENST00000607518 1143 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL590410.1-201ENST00000617925 333 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AP005019.3-201ENST00000620418 560 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AL139254.3-201ENST00000641097 674 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 AC091046.3-201ENST00000631455 1574 ntBASIC4.7□□□□□ -1.66
RFWD3Q6PCD5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 OR56B2P-202ENST00000641377 2453 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AP001002.1-201ENST00000625148 1513 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RNU4-39P-201ENST00000362455 127 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RCC2P2-201ENST00000422174 918 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC007064.3-201ENST00000422608 359 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RPL18P10-201ENST00000425606 538 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RPL12P28-201ENST00000430852 489 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 TXNP2-201ENST00000443918 295 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RPL31P53-201ENST00000457065 348 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 ATP5G1P3-201ENST00000463301 410 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 NIP7P2-201ENST00000485801 544 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AP002981.1-201ENST00000517692 975 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC115286.1-201ENST00000604298 434 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC012409.3-201ENST00000611343 981 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 MIR6758-201ENST00000620653 63 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC055839.1-201ENST00000634467 498 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 OR2L1P-202ENST00000641567 1023 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 LINC01808-202ENST00000641680 1116 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.69□□□□□ -1.66
RFWD3Q6PCD5 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 AL450326.2-201ENST00000421913 1962 ntBASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 MIR7-1-201ENST00000384871 110 ntBASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 AC098592.2-201ENST00000413158 265 ntBASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 OR2X1P-201ENST00000421144 687 ntBASIC4.68□□□□□ -1.66
RFWD3Q6PCD5 AJ239321.1-201ENST00000424255 564 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms