Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC019322.1-201ENST00000571869 389 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 MIR7853-201ENST00000584820 132 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 AC006116.3-201ENST00000592968 361 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.52□□□□□ -1.69
EFNB3Q15768 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.52□□□□□ -1.69
EFNB3Q15768 AL162574.1-201ENST00000615702 950 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.52□□□□□ -1.69
EFNB3Q15768 BNIP3P41-202ENST00000616656 861 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 AC099494.2-201ENST00000623371 978 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 AC079416.3-201ENST00000624479 549 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 AC002525.1-201ENST00000624392 1622 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.52□□□□□ -1.69
EFNB3Q15768 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.52□□□□□ -1.69
EFNB3Q15768 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.52□□□□□ -1.69
EFNB3Q15768 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.52□□□□□ -1.69
EFNB3Q15768 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.52□□□□□ -1.69
EFNB3Q15768 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
EFNB3Q15768 AC092747.4-201ENST00000620519 1861 ntBASIC4.52□□□□□ -1.69
EFNB3Q15768 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 MTND4P31-201ENST00000425607 1343 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC114947.2-201ENST00000565748 2125 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC104964.3-201ENST00000606115 2860 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 RNU6-1242P-201ENST00000391052 103 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL590290.1-201ENST00000405336 380 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC009784.1-201ENST00000426484 460 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 RPS24P8-201ENST00000431490 402 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AP000936.3-201ENST00000438127 255 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.51□□□□□ -1.69
EFNB3Q15768 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 CBX1P2-201ENST00000453841 458 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 DNAJB5P1-201ENST00000454004 806 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EFNB3Q15768 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 RPL7AP6-201ENST00000477943 801 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC004453.1-201ENST00000487895 408 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC022133.1-201ENST00000490961 571 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC012400.1-201ENST00000518452 381 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 MRPS36P3-201ENST00000519284 130 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC090695.1-201ENST00000561269 1222 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC145350.1-201ENST00000567426 208 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 AC010503.3-201ENST00000594355 540 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 PCNAP1-202ENST00000595299 752 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 VN1R88P-201ENST00000596787 292 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 DUXAP3-201ENST00000603616 594 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC021749.1-201ENST00000604322 607 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC009597.2-201ENST00000604659 592 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AL583856.2-201ENST00000606298 543 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC007349.4-201ENST00000608114 532 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC055764.2-201ENST00000610089 670 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 U6.48-201ENST00000618523 106 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 MIR6730-201ENST00000622213 67 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.51□□□□□ -1.69
EFNB3Q15768 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 LINC01739-205ENST00000641890 573 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
EFNB3Q15768 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 AL034549.2-201ENST00000618285 3373 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.51□□□□□ -1.69
EFNB3Q15768 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 MTND4P10-201ENST00000446199 1363 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 PANDAR-201ENST00000629595 1506 ntBASIC4.51□□□□□ -1.69
EFNB3Q15768 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
EFNB3Q15768 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms