Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU6-310P-201ENST00000384655 107 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 MIR506-201ENST00000384998 124 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 PRELID1P1-201ENST00000403549 660 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 AL357752.1-201ENST00000412817 349 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 RPL37P3-201ENST00000456825 293 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 RNA5SP92-201ENST00000516437 110 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC104695.3-201ENST00000604052 296 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 AL451085.1-201ENST00000604546 690 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 RN7SKP23-201ENST00000625159 4301 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 AC090643.1-201ENST00000623600 3100 ntBASIC7.68□□□□□ -1.18
LRCH3Q96II8 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.68□□□□□ -1.18
LRCH3Q96II8 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
LRCH3Q96II8 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AL049780.3-201ENST00000624612 1583 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 THAP12P7-201ENST00000520248 2290 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC114546.3-201ENST00000623582 1734 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 Y_RNA.252-201ENST00000364556 101 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 RNU4-6P-201ENST00000410804 122 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 BX510359.3-201ENST00000422168 306 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC007283.2-201ENST00000424739 197 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AL353777.1-201ENST00000425552 326 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC073109.1-201ENST00000445066 978 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 RPL7L1P11-201ENST00000446092 721 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 DDX3P2-201ENST00000446138 111 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 EIF4EBP2P1-201ENST00000450009 343 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 GAPDHP14-201ENST00000450472 937 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 PRPF38AP1-201ENST00000451976 933 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 GMFBP1-201ENST00000467831 427 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 PSMA2P2-201ENST00000504319 686 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC091849.1-201ENST00000509920 121 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 HMGB1P23-201ENST00000518743 568 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC123904.2-201ENST00000548059 300 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 PPIAP6-201ENST00000557078 499 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 EEF1B2P1-201ENST00000567221 672 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 RN7SL667P-201ENST00000582817 298 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 SMIM12P1-201ENST00000603004 274 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC009237.17-201ENST00000618111 748 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC026634.1-201ENST00000634369 198 ntBASIC7.67□□□□□ -1.18
LRCH3Q96II8 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LRCH3Q96II8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LRCH3Q96II8 AP002370.1-201ENST00000528055 1602 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms