Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 RNU1-63P-201ENST00000383902 164 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL590704.1-201ENST00000402856 794 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 MIR1271-201ENST00000408537 86 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AP000357.1-201ENST00000409926 1165 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 RPEP2-201ENST00000432149 701 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC010374.1-201ENST00000503762 1237 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 KCTD9P2-201ENST00000512203 1013 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 RPL23AP53-201ENST00000521854 457 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 IGKV2D-19-201ENST00000523346 262 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 GMPSP1-201ENST00000514075 579 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL137843.1-201ENST00000605078 385 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL592436.1-201ENST00000605135 558 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL451086.1-201ENST00000605596 223 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 MIR331-201ENST00000362302 94 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL050321.1-201ENST00000432363 400 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC093166.2-201ENST00000455969 1017 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AF213884.1-201ENST00000488102 463 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AL049781.1-201ENST00000623195 3585 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AL929601.4-201ENST00000613011 1341 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC092447.2-201ENST00000435487 669 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 FTH1P25-201ENST00000447665 469 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 GAPDHP36-201ENST00000480688 918 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 RN7SL323P-201ENST00000494712 295 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 MYL12BP2-201ENST00000503948 512 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 MIR3124-201ENST00000582636 67 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC006272.2-201ENST00000594725 163 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC012468.1-201ENST00000604888 430 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AL021997.2-201ENST00000615674 271 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC073346.2-201ENST00000624724 2058 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 TBCAP1-201ENST00000436520 327 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AL512326.1-201ENST00000443050 721 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 UBE2DNL-203ENST00000474922 222 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC007546.2-201ENST00000623996 360 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 LINC01808-202ENST00000641680 1116 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 MIR34B-201ENST00000385076 84 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 SCARNA14-201ENST00000516903 136 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC105031.1-201ENST00000518550 476 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 AL356121.2-201ENST00000624715 780 ntBASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
ALMS1Q8TCU4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
ALMS1Q8TCU4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms