Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 MIR1193-201ENST00000408109 78 ntBASIC6.53□□□□□ -1.36
VPS8Q8N3P4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 AC007066.2-202ENST00000566531 914 ntBASIC6.53□□□□□ -1.36
VPS8Q8N3P4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 AC023043.4-201ENST00000612081 449 ntBASIC6.53□□□□□ -1.36
VPS8Q8N3P4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 RAB9AP4-201ENST00000415230 609 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 DYNLL1P7-201ENST00000429273 258 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 TPT1P3-201ENST00000492841 512 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC007224.1-201ENST00000564410 144 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC007599.1-201ENST00000568688 1174 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 AC090948.2-201ENST00000607363 564 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 RNU4-89P-201ENST00000607443 133 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
VPS8Q8N3P4 DDX18P4-201ENST00000511690 1966 ntBASIC6.52□□□□□ -1.37
VPS8Q8N3P4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 HDGFP1-201ENST00000405943 252 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 MAPRE1P3-201ENST00000435438 796 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 RPL5P32-201ENST00000454085 879 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 RPS7P7-201ENST00000463499 571 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 RPL23AP2-201ENST00000471227 466 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AC093591.2-201ENST00000565254 3843 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 QTRT1P1-201ENST00000604344 1078 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 AC006971.1-201ENST00000407916 4486 ntBASIC6.51□□□□□ -1.37
VPS8Q8N3P4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.51□□□□□ -1.37
VPS8Q8N3P4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 RNU1-15P-201ENST00000353977 144 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 RN7SKP263-201ENST00000411194 309 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 RPL21P89-201ENST00000444021 467 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 FTH1P21-201ENST00000512179 511 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC063950.1-201ENST00000552036 308 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC015922.4-201ENST00000612568 690 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 SMG1P4-204ENST00000523028 4131 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 SNORA57.1-201ENST00000391227 145 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 VDAC2P1-201ENST00000399358 958 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC009237.10-201ENST00000414112 510 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC134698.5-201ENST00000519444 336 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.5□□□□□ -1.37
VPS8Q8N3P4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms