Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 MFSD13B-201ENST00000420133 1290 ntBASIC5.56□□□□□ -1.52
RFC4P35249 ARAFP1-201ENST00000422172 605 ntBASIC5.56□□□□□ -1.52
RFC4P35249 VTI1BP4-201ENST00000427516 527 ntBASIC5.56□□□□□ -1.52
RFC4P35249 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC4P35249 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.56□□□□□ -1.52
RFC4P35249 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.56□□□□□ -1.52
RFC4P35249 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 NPM1P41-201ENST00000512920 831 ntBASIC5.56□□□□□ -1.52
RFC4P35249 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 MIR4660-201ENST00000583549 74 ntBASIC5.56□□□□□ -1.52
RFC4P35249 AL161729.3-201ENST00000603533 673 ntBASIC5.56□□□□□ -1.52
RFC4P35249 AC006363.1-201ENST00000603806 463 ntBASIC5.56□□□□□ -1.52
RFC4P35249 RNU4-89P-201ENST00000607443 133 ntBASIC5.56□□□□□ -1.52
RFC4P35249 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 AC104260.2-201ENST00000623551 3497 ntBASIC5.56□□□□□ -1.52
RFC4P35249 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
RFC4P35249 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
RFC4P35249 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 AC107068.1-201ENST00000563286 4218 ntBASIC5.56□□□□□ -1.52
RFC4P35249 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC4P35249 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC4P35249 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 VPS35P1-201ENST00000563400 1518 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AL603750.1-201ENST00000624216 1717 ntBASIC5.55□□□□□ -1.52
RFC4P35249 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFC4P35249 RNA5SP130-201ENST00000364431 114 ntBASIC5.55□□□□□ -1.52
RFC4P35249 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFC4P35249 OR8G2P-201ENST00000412796 908 ntBASIC5.55□□□□□ -1.52
RFC4P35249 RPSAP41-201ENST00000439695 860 ntBASIC5.55□□□□□ -1.52
RFC4P35249 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC4P35249 RRM2P4-201ENST00000441721 562 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC4P35249 AC146944.2-203ENST00000502493 354 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC4P35249 KCTD9P2-201ENST00000512203 1013 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC139495.1-202ENST00000513164 354 ntBASIC5.55□□□□□ -1.52
RFC4P35249 RNA5SP249-201ENST00000516127 99 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.55□□□□□ -1.52
RFC4P35249 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.55□□□□□ -1.52
RFC4P35249 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC4P35249 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.55□□□□□ -1.52
RFC4P35249 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.55□□□□□ -1.52
RFC4P35249 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RFC4P35249 AL359922.3-201ENST00000624779 1670 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC4P35249 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RFC4P35249 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RFC4P35249 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RFC4P35249 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.55□□□□□ -1.52
RFC4P35249 TCP11X1-202ENST00000622971 1372 ntBASIC5.55□□□□□ -1.52
RFC4P35249 AC104623.2-202ENST00000623477 4002 ntBASIC5.54□□□□□ -1.52
RFC4P35249 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RFC4P35249 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.54□□□□□ -1.52
RFC4P35249 RN7SKP33-201ENST00000410942 340 ntBASIC5.54□□□□□ -1.52
RFC4P35249 MTND4LP21-201ENST00000415303 295 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AL590806.1-201ENST00000415818 853 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC4P35249 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC4P35249 COX6B1P7-201ENST00000430845 235 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AC007389.2-201ENST00000434630 306 ntBASIC5.54□□□□□ -1.52
RFC4P35249 RPS29P7-201ENST00000439662 171 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AC114495.1-201ENST00000441274 436 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AL512326.1-201ENST00000443050 721 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC4P35249 VN1R105P-201ENST00000486595 910 ntBASIC5.54□□□□□ -1.52
RFC4P35249 TPT1P3-201ENST00000492841 512 ntBASIC5.54□□□□□ -1.52
RFC4P35249 RN7SL812P-201ENST00000493791 279 ntBASIC5.54□□□□□ -1.52
RFC4P35249 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 HNRNPRP2-201ENST00000528421 743 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.54□□□□□ -1.52
RFC4P35249 AC127024.5-201ENST00000580085 462 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.54□□□□□ -1.52
RFC4P35249 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RFC4P35249 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 AC139769.1-204ENST00000472297 1931 ntBASIC5.54□□□□□ -1.52
RFC4P35249 AC005005.4-201ENST00000623789 16698 ntBASIC5.54□□□□□ -1.52
RFC4P35249 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RFC4P35249 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RFC4P35249 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RFC4P35249 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms