Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RNA5SP503-201ENST00000517047 117 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC7.56□□□□□ -1.2
COL9A1P20849 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.56□□□□□ -1.2
COL9A1P20849 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.56□□□□□ -1.2
COL9A1P20849 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 MIR4703-201ENST00000577728 79 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.56□□□□□ -1.2
COL9A1P20849 RPL7AP69-201ENST00000595306 806 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 Z98751.3-201ENST00000604447 521 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 OR6R2P-201ENST00000609216 300 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 uc_338.12-201ENST00000616344 181 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 AC069234.4-201ENST00000621276 412 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 U6.101-201ENST00000637707 76 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
COL9A1P20849 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 RNF6P1-201ENST00000444889 1784 ntBASIC7.56□□□□□ -1.2
COL9A1P20849 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.56□□□□□ -1.2
COL9A1P20849 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL9A1P20849 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.56□□□□□ -1.2
COL9A1P20849 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
COL9A1P20849 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 TIMM21-204ENST00000580087 2524 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 USP9YP4-201ENST00000424401 1745 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 FANCD2P2-201ENST00000437591 1400 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
COL9A1P20849 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 SNORA62.1-201ENST00000364287 154 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 RN7SKP191-201ENST00000364713 306 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 RNU6-432P-201ENST00000384196 109 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
COL9A1P20849 UBE2V1P2-201ENST00000397758 440 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.55□□□□□ -1.2
COL9A1P20849 BX510359.3-201ENST00000422168 306 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 RPS15AP10-201ENST00000432472 382 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AL451139.1-201ENST00000434718 346 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 AC105402.2-201ENST00000438503 358 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC7.55□□□□□ -1.2
COL9A1P20849 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 RPL7P5-201ENST00000471472 736 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 MYL6P4-201ENST00000477911 453 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AC008526.1-201ENST00000509149 338 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 IGHV3-57-201ENST00000520143 280 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.55□□□□□ -1.2
COL9A1P20849 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.55□□□□□ -1.2
COL9A1P20849 RPS4XP21-201ENST00000603814 750 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 MIR7973-1-201ENST00000614683 76 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 AC103858.2-201ENST00000621471 543 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 AC004014.2-201ENST00000623718 5122 ntBASIC7.55□□□□□ -1.2
COL9A1P20849 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL9A1P20849 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL9A1P20849 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
COL9A1P20849 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
COL9A1P20849 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
COL9A1P20849 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.54□□□□□ -1.2
COL9A1P20849 MRE11P1-201ENST00000464884 2127 ntBASIC7.54□□□□□ -1.2
COL9A1P20849 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.54□□□□□ -1.2
COL9A1P20849 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
COL9A1P20849 AC016930.1-201ENST00000468766 2205 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms