Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AP001836.1-201ENST00000604675 523 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 uc_338.26-201ENST00000612659 160 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC006338.1-201ENST00000618453 749 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC105749.1-201ENST00000631338 2008 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CASC19-260ENST00000641828 2001 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 AC016251.2-201ENST00000623393 3089 ntBASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.91□□□□□ -1.14
CSB-PGBD3P0DP91 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 KYNUP3-201ENST00000574386 1341 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 HMGB1P5-201ENST00000255320 642 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 SNORA70-201ENST00000384436 135 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 MIR1303-201ENST00000408625 86 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 NME1P1-201ENST00000420914 382 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC004448.2-201ENST00000422360 586 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 NPM1P24-201ENST00000428039 894 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 ATP5HP2-201ENST00000433885 485 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC012075.1-201ENST00000436549 580 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 GAPDHP58-201ENST00000438477 1006 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 PTMAP6-201ENST00000439110 327 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC093155.1-201ENST00000440164 826 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 ARAFP2-201ENST00000440565 559 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 TRIM60P18-201ENST00000441518 828 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 SNRPGP9-201ENST00000456025 225 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 RPL5P24-201ENST00000463742 885 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 PFN1P6-201ENST00000476786 399 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 UBA52P7-201ENST00000486088 380 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 RNU6-678P-201ENST00000516832 109 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC092709.1-201ENST00000521355 1045 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 EIF5A2P1-201ENST00000564027 460 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 AC005730.3-201ENST00000583067 366 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 OR5H6-203ENST00000642105 978 ntBASIC7.9□□□□□ -1.14
CSB-PGBD3P0DP91 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CSB-PGBD3P0DP91 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
CSB-PGBD3P0DP91 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CSB-PGBD3P0DP91 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
CSB-PGBD3P0DP91 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
CSB-PGBD3P0DP91 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 Y_RNA.256-201ENST00000364594 104 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 SNORD115-47-201ENST00000391226 86 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 RN7SKP222-201ENST00000410651 315 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 RPL7P44-201ENST00000424827 742 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 MED14P1-201ENST00000430517 648 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 FMO7P-201ENST00000436045 768 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 RFC5P1-201ENST00000454419 874 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 BX248409.1-201ENST00000455497 255 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 RNU7-27P-201ENST00000459281 62 ntBASIC7.89□□□□□ -1.15
CSB-PGBD3P0DP91 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms