Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.38□□□□□ -1.71
HCN1O60741 MTCO1P45-201ENST00000431457 267 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AC005154.2-201ENST00000438110 379 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN1O60741 CCRL1P1-201ENST00000449542 1053 ntBASIC4.38□□□□□ -1.71
HCN1O60741 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AC006463.2-201ENST00000473326 348 ntBASIC4.38□□□□□ -1.71
HCN1O60741 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.38□□□□□ -1.71
HCN1O60741 AC104971.1-201ENST00000495117 578 ntBASIC4.38□□□□□ -1.71
HCN1O60741 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 AC104997.1-201ENST00000519761 717 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN1O60741 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN1O60741 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN1O60741 AC079075.1-201ENST00000559543 878 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN1O60741 AC018552.3-201ENST00000567416 561 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.38□□□□□ -1.71
HCN1O60741 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN1O60741 AC022387.2-201ENST00000604050 448 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AL121932.1-201ENST00000605542 214 ntBASIC4.38□□□□□ -1.71
HCN1O60741 FAM27B-201ENST00000610601 213 ntBASIC4.38□□□□□ -1.71
HCN1O60741 RMST_5.1-201ENST00000618704 126 ntBASIC4.38□□□□□ -1.71
HCN1O60741 AC015804.1-201ENST00000622935 435 ntBASIC4.38□□□□□ -1.71
HCN1O60741 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.38□□□□□ -1.71
HCN1O60741 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.38□□□□□ -1.71
HCN1O60741 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HCN1O60741 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 AC017104.4-201ENST00000636283 1592 ntBASIC4.37□□□□□ -1.71
HCN1O60741 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HCN1O60741 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HCN1O60741 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
HCN1O60741 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
HCN1O60741 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.37□□□□□ -1.71
HCN1O60741 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.37□□□□□ -1.71
HCN1O60741 PPIAP13-201ENST00000434706 478 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AC016831.4-201ENST00000438302 307 ntBASIC4.37□□□□□ -1.71
HCN1O60741 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN1O60741 ELOCP10-201ENST00000440624 327 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AC011753.3-201ENST00000443436 406 ntBASIC4.37□□□□□ -1.71
HCN1O60741 TXNP2-201ENST00000443918 295 ntBASIC4.37□□□□□ -1.71
HCN1O60741 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 TPT1P13-201ENST00000449760 499 ntBASIC4.37□□□□□ -1.71
HCN1O60741 RPS29P33-201ENST00000456717 146 ntBASIC4.37□□□□□ -1.71
HCN1O60741 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HCN1O60741 RN7SL41P-201ENST00000476144 297 ntBASIC4.37□□□□□ -1.71
HCN1O60741 IGLV2-34-201ENST00000490007 283 ntBASIC4.37□□□□□ -1.71
HCN1O60741 RPS4XP18-201ENST00000495480 763 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN1O60741 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AC113430.1-201ENST00000506872 718 ntBASIC4.37□□□□□ -1.71
HCN1O60741 RNU1-6P-201ENST00000516290 144 ntBASIC4.37□□□□□ -1.71
HCN1O60741 SNORA48.9-201ENST00000516419 162 ntBASIC4.37□□□□□ -1.71
HCN1O60741 SNORA26.10-201ENST00000516427 141 ntBASIC4.37□□□□□ -1.71
HCN1O60741 SNORA70.17-201ENST00000516449 133 ntBASIC4.37□□□□□ -1.71
HCN1O60741 RNA5SP392-201ENST00000516905 112 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN1O60741 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN1O60741 AL049839.1-201ENST00000556151 657 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 AC022726.1-201ENST00000587475 207 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.37□□□□□ -1.71
HCN1O60741 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 AC011453.2-201ENST00000603737 729 ntBASIC4.37□□□□□ -1.71
HCN1O60741 ELOCP34-201ENST00000604436 327 ntBASIC4.37□□□□□ -1.71
HCN1O60741 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.37□□□□□ -1.71
HCN1O60741 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.37□□□□□ -1.71
HCN1O60741 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.37□□□□□ -1.71
HCN1O60741 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.37□□□□□ -1.71
HCN1O60741 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HCN1O60741 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HCN1O60741 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCN1O60741 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.36□□□□□ -1.71
HCN1O60741 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCN1O60741 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCN1O60741 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HCN1O60741 RNU1-108P-201ENST00000362556 161 ntBASIC4.36□□□□□ -1.71
HCN1O60741 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.36□□□□□ -1.71
HCN1O60741 SNORA56-201ENST00000383966 129 ntBASIC4.36□□□□□ -1.71
HCN1O60741 RNU6-398P-201ENST00000384143 109 ntBASIC4.36□□□□□ -1.71
HCN1O60741 U3.30-201ENST00000391308 210 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms