Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HMGN2P36-201ENST00000529541 409 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AL358913.1-201ENST00000554342 121 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AC137800.2-201ENST00000574375 120 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AC012417.1-201ENST00000582307 1039 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 VN1R79P-201ENST00000593540 513 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 BNIP3P23-201ENST00000599655 511 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AP000403.1-201ENST00000603349 851 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 BNIP3P11-201ENST00000603878 563 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AL008723.3-201ENST00000608926 449 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AL359535.1-201ENST00000612100 1087 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AC005618.4-201ENST00000625053 554 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 CRYM-AS1-204ENST00000637983 556 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 TCP11X1-202ENST00000622971 1372 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 LINC01963-201ENST00000562038 3148 ntBASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TMEM88BA6NKF7 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 MIR199B-201ENST00000384849 110 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RPL5P5-201ENST00000392009 893 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RPL17P50-201ENST00000396131 546 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC016739.1-201ENST00000405359 345 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RPS3AP24-201ENST00000407896 734 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 NME1P1-201ENST00000420914 382 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC073614.1-201ENST00000438690 650 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 YWHABP1-201ENST00000445359 727 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 WASF1P1-201ENST00000447560 1131 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RANP2-201ENST00000456833 229 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RPS15AP1-201ENST00000457423 391 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC010301.1-201ENST00000473936 355 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RPSAP50-201ENST00000481955 852 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC106872.3-201ENST00000495104 446 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 POU5F1P7-201ENST00000508759 541 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RN7SKP96-201ENST00000516948 297 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 OR4A12P-201ENST00000530847 918 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC018558.5-201ENST00000565840 952 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC141257.3-201ENST00000572906 215 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 BNIP3P30-201ENST00000601184 574 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 TAS2R6P-201ENST00000605022 826 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 IMMP1LP1-201ENST00000605170 488 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AP001521.1-201ENST00000609150 300 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC100827.5-201ENST00000615883 426 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC096861.1-201ENST00000616652 240 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AL356321.1-201ENST00000621360 228 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC131009.3-201ENST00000621809 287 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AC138649.3-201ENST00000622154 254 ntBASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TMEM88BA6NKF7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 AC140479.2-201ENST00000421567 3130 ntBASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 AC011455.2-201ENST00000599320 3336 ntBASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.15□□□□□ -1.27
TMEM88BA6NKF7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms