Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC006971.1-201ENST00000407916 4486 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RNU1-132P-201ENST00000364300 164 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RNA5SP366-201ENST00000365454 123 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RNU6-729P-201ENST00000384399 107 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AL359643.1-201ENST00000404109 423 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RPS20P14-201ENST00000412545 360 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RPL7P33-201ENST00000444159 742 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 NUTF2P3-201ENST00000448540 384 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AL672167.3-201ENST00000465951 960 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RN7SL41P-201ENST00000476144 297 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AL161747.1-201ENST00000480068 358 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 RN7SKP46-201ENST00000515942 234 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 NPM1P6-201ENST00000521088 871 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 SETP1-201ENST00000556014 845 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 IPO5P1-202ENST00000600039 287 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC022106.2-201ENST00000620114 757 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC140479.6-201ENST00000633535 357 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AC009951.1-201ENST00000623674 2614 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 AP000756.2-201ENST00000624168 2567 ntBASIC4.78□□□□□ -1.64
NXF3Q9H4D5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.78□□□□□ -1.64
NXF3Q9H4D5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AL158163.1-201ENST00000603915 1649 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 RNA5SP479-201ENST00000364858 117 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 NRBF2P2-201ENST00000413087 861 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC114495.1-201ENST00000441274 436 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 OR52Y1P-201ENST00000452418 828 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 UQCRHP4-201ENST00000471686 272 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC091167.1-201ENST00000492017 396 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 MRPL49P2-201ENST00000521066 465 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC008966.2-201ENST00000606157 453 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC091905.2-201ENST00000623143 306 ntBASIC4.77□□□□□ -1.65
NXF3Q9H4D5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NXF3Q9H4D5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 RNU4-44P-201ENST00000363050 141 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 MIR921-201ENST00000401133 56 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AL356967.1-201ENST00000406305 431 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 SNORA11F-201ENST00000408237 128 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 EIF4A1P1-201ENST00000420241 934 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC007064.3-201ENST00000422608 359 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.76□□□□□ -1.65
NXF3Q9H4D5 AC108751.2-201ENST00000469993 231 ntBASIC4.76□□□□□ -1.65
NXF3Q9H4D5 STRADBP1-201ENST00000478954 1281 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms