Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC069304.1-201ENST00000491593 704 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 FRG1EP-201ENST00000634469 770 ntBASIC3.55□□□□□ -1.84
CSMD1Q96PZ7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC139769.1-204ENST00000472297 1931 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 SPATA31D5P-201ENST00000376459 4784 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 UBE2CP3-201ENST00000502715 450 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC123769.2-201ENST00000624332 5984 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AL133383.2-201ENST00000622958 2336 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 RNU4-6P-201ENST00000410804 122 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC010486.1-201ENST00000511793 424 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 AC013412.1-201ENST00000610687 192 ntBASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.54□□□□□ -1.84
CSMD1Q96PZ7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 RNA5SP73-201ENST00000516744 108 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 AC105031.1-201ENST00000518550 476 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 FP325313.1-201ENST00000638228 703 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ZNF962P-201ENST00000443465 3140 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ERCC6-202ENST00000374127 1782 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 CBX1P3-201ENST00000413296 527 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 AC114495.1-201ENST00000441274 436 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 MRPL35P4-201ENST00000453682 566 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 RPS27AP17-201ENST00000463344 455 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 AC104333.2-201ENST00000422630 192 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 RPL5P2-201ENST00000429598 854 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 MIR4672-201ENST00000583126 81 ntBASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CSMD1Q96PZ7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CSMD1Q96PZ7 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 NAP1L4P1-201ENST00000319092 1157 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 RPS20P14-201ENST00000412545 360 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MTCO1P45-201ENST00000431457 267 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 UBE2V1P3-201ENST00000439651 417 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 MIR4660-201ENST00000583549 74 ntBASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CSMD1Q96PZ7 AL442128.2-201ENST00000620246 1824 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms