Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 VN1R74P-201ENST00000613259 503 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL139407.1-201ENST00000613826 1175 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC023509.5-201ENST00000617434 807 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 VN1R7P-201ENST00000619242 903 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC123767.1-202ENST00000620407 817 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.23□□□□□ -1.73
CX3CL1P78423 AC004232.3-201ENST00000622977 525 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 CDRT1-208ENST00000630868 794 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CX3CL1P78423 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.23□□□□□ -1.73
CX3CL1P78423 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.23□□□□□ -1.73
CX3CL1P78423 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CX3CL1P78423 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CX3CL1P78423 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CX3CL1P78423 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC138393.1-206ENST00000540997 1886 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 RN7SKP160-201ENST00000363804 340 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RN7SKP153-201ENST00000365026 316 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 OR52E6-202ENST00000379946 954 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 MIR105-1-201ENST00000385222 81 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RNA5SP339-201ENST00000390987 122 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 MTCO1P56-201ENST00000401674 224 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RN7SKP59-201ENST00000410520 314 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC009302.1-201ENST00000417147 390 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC234782.4-201ENST00000417646 1048 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 GAPDHP49-201ENST00000421421 961 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC124944.2-201ENST00000429866 1242 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RPL19P16-201ENST00000433839 588 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 BX248409.1-201ENST00000455497 255 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AL133445.1-201ENST00000467051 452 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC079203.1-201ENST00000487972 404 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 RPL21P131-201ENST00000497298 483 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 BX510359.5-201ENST00000515651 304 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RNU6-416P-201ENST00000516265 103 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 RN7SKP283-201ENST00000517197 270 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC126177.5-201ENST00000549599 178 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CL1P78423 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.22□□□□□ -1.73
CX3CL1P78423 RPL10P14-201ENST00000565265 298 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC006116.5-201ENST00000591936 559 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CL1P78423 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 AC124856.1-201ENST00000600819 896 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC096553.1-201ENST00000605169 829 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AL355816.1-201ENST00000607951 118 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 MIR6837-201ENST00000620884 64 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AP001005.3-201ENST00000622049 129 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AP002967.1-201ENST00000624203 539 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CX3CL1P78423 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CL1P78423 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 AP000756.2-201ENST00000624168 2567 ntBASIC4.22□□□□□ -1.73
CX3CL1P78423 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CX3CL1P78423 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CL1P78423 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CX3CL1P78423 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CX3CL1P78423 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CX3CL1P78423 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CX3CL1P78423 AC004817.4-201ENST00000602396 3625 ntBASIC4.21□□□□□ -1.73
CX3CL1P78423 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CX3CL1P78423 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CL1P78423 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CX3CL1P78423 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 OR9G4-201ENST00000302957 984 ntBASIC4.21□□□□□ -1.74
CX3CL1P78423 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CL1P78423 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CL1P78423 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CL1P78423 RNU6-224P-201ENST00000384055 107 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms