Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 NFYAP1-201ENST00000431953 972 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL39P62891 RPL21P126-201ENST00000470049 478 ntBASIC2.92□□□□□ -1.94
RPL39P62891 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL39P62891 RPL7AP6-201ENST00000477943 801 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC004815.1-201ENST00000484185 331 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC011005.3-201ENST00000491624 395 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 AC010374.1-201ENST00000503762 1237 ntBASIC2.92□□□□□ -1.94
RPL39P62891 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 MIR2114-201ENST00000516645 80 ntBASIC2.92□□□□□ -1.94
RPL39P62891 NARSP2-201ENST00000518524 679 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL39P62891 AP000827.1-201ENST00000527814 258 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL39P62891 HMGN2P6-201ENST00000551091 273 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.92□□□□□ -1.94
RPL39P62891 GNRHR2P1-201ENST00000555315 631 ntBASIC2.92□□□□□ -1.94
RPL39P62891 UBE2FP2-201ENST00000566646 462 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 AC079171.1-201ENST00000568788 914 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC2.92□□□□□ -1.94
RPL39P62891 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.92□□□□□ -1.94
RPL39P62891 AC025175.1-201ENST00000606482 759 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AC018690.1-201ENST00000608144 626 ntBASIC2.92□□□□□ -1.94
RPL39P62891 AL049536.1-201ENST00000625043 744 ntBASIC2.92□□□□□ -1.94
RPL39P62891 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.92□□□□□ -1.94
RPL39P62891 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 STK31-205ENST00000433467 3085 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.92□□□□□ -1.94
RPL39P62891 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RPL39P62891 AL031985.3-201ENST00000565390 2449 ntBASIC2.92□□□□□ -1.94
RPL39P62891 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RPL39P62891 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RPL39P62891 OFD1P8Y-201ENST00000449148 1433 ntBASIC2.92□□□□□ -1.94
RPL39P62891 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.92□□□□□ -1.94
RPL39P62891 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPL39P62891 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
RPL39P62891 AC012020.1-201ENST00000624541 1728 ntBASIC2.91□□□□□ -1.94
RPL39P62891 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 AC006504.1-201ENST00000562493 3666 ntBASIC2.91□□□□□ -1.94
RPL39P62891 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPL39P62891 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPL39P62891 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RPL39P62891 AL049697.2-201ENST00000403708 294 ntBASIC2.91□□□□□ -1.94
RPL39P62891 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC2.91□□□□□ -1.94
RPL39P62891 USP12PY-201ENST00000427677 1064 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.91□□□□□ -1.94
RPL39P62891 RPL23AP52-201ENST00000439311 478 ntBASIC2.91□□□□□ -1.94
RPL39P62891 CEACAMP6-201ENST00000452007 574 ntBASIC2.91□□□□□ -1.94
RPL39P62891 RPL23AP81-201ENST00000455252 467 ntBASIC2.91□□□□□ -1.94
RPL39P62891 RPS26P39-201ENST00000469206 341 ntBASIC2.91□□□□□ -1.94
RPL39P62891 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.91□□□□□ -1.94
RPL39P62891 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 PGBD4P4-201ENST00000509673 613 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC2.91□□□□□ -1.94
RPL39P62891 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC2.91□□□□□ -1.94
RPL39P62891 AC069061.3-201ENST00000582254 823 ntBASIC2.91□□□□□ -1.94
RPL39P62891 MIR4737-201ENST00000583979 81 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AC008536.1-201ENST00000602872 669 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AL445222.1-201ENST00000607259 628 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AC100847.1-201ENST00000611316 481 ntBASIC2.91□□□□□ -1.94
RPL39P62891 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 RN7SL722P-201ENST00000617780 284 ntBASIC2.91□□□□□ -1.94
RPL39P62891 RN7SL565P-201ENST00000618246 284 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AP005019.3-201ENST00000620418 560 ntBASIC2.91□□□□□ -1.94
RPL39P62891 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPL39P62891 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.91□□□□□ -1.94
RPL39P62891 AL929601.4-201ENST00000613011 1341 ntBASIC2.91□□□□□ -1.94
RPL39P62891 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.9□□□□□ -1.94
RPL39P62891 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC2.9□□□□□ -1.94
RPL39P62891 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
RPL39P62891 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
RPL39P62891 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
RPL39P62891 AC002524.1-201ENST00000411687 547 ntBASIC2.9□□□□□ -1.95
RPL39P62891 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RPL39P62891 RPL23AP27-201ENST00000415161 451 ntBASIC2.9□□□□□ -1.95
RPL39P62891 TMSB10P2-201ENST00000416049 131 ntBASIC2.9□□□□□ -1.95
RPL39P62891 UQCRBP1-201ENST00000421129 336 ntBASIC2.9□□□□□ -1.95
RPL39P62891 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.9□□□□□ -1.95
RPL39P62891 AC008072.1-201ENST00000434254 824 ntBASIC2.9□□□□□ -1.95
RPL39P62891 AC096638.2-201ENST00000434965 711 ntBASIC2.9□□□□□ -1.95
RPL39P62891 FTH1P16-201ENST00000435241 552 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms