Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
RHBDL3P58872 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RHBDL3P58872 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 ASNSP1-201ENST00000518311 1939 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RHBDL3P58872 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 RNA5SP191-201ENST00000362585 102 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AL807761.1-201ENST00000417622 171 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 MTND2P40-201ENST00000436718 841 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 CEACAMP9-201ENST00000442990 513 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 AC011753.3-201ENST00000443436 406 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 Z95152.1-201ENST00000453556 656 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AC005412.2-201ENST00000492004 341 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.99□□□□□ -1.45
RHBDL3P58872 CR383656.6-201ENST00000550518 394 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 AP001521.2-201ENST00000608772 546 ntBASIC5.99□□□□□ -1.45
RHBDL3P58872 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.99□□□□□ -1.45
RHBDL3P58872 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RHBDL3P58872 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RHBDL3P58872 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 DNM1P47-203ENST00000571780 12667 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDL3P58872 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RHBDL3P58872 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 RNU6-932P-201ENST00000391108 106 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 MTATP6P31-201ENST00000406985 692 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 RNA5SP113-201ENST00000410486 84 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDL3P58872 FABP5P3-201ENST00000437960 408 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 RPL5P25-201ENST00000441148 775 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 AC009263.1-201ENST00000441193 1239 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 RNF2P1-201ENST00000442955 1010 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 PTMAP3-201ENST00000447474 330 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 GAPDHP14-201ENST00000450472 937 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC090948.2-201ENST00000607363 564 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.98□□□□□ -1.45
RHBDL3P58872 AC092608.3-201ENST00000625017 386 ntBASIC5.98□□□□□ -1.45
RHBDL3P58872 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.98□□□□□ -1.45
RHBDL3P58872 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RHBDL3P58872 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.97□□□□□ -1.45
RHBDL3P58872 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RHBDL3P58872 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RHBDL3P58872 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms