Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AL139128.1-201ENST00000413921 941 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 BX510359.2-201ENST00000417920 305 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AL049745.1-201ENST00000433953 286 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 CYCSP11-201ENST00000436426 315 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AL772161.1-201ENST00000439130 476 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC079804.1-201ENST00000461922 436 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC008126.1-201ENST00000549019 480 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 GMCL1P2-201ENST00000605230 823 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC020634.1-201ENST00000608701 549 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 AC103858.2-201ENST00000621471 543 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 MIR6730-201ENST00000622213 67 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 OR13C3-201ENST00000374781 1108 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 RNU6-1263P-201ENST00000384601 106 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 SNORA74C-2-201ENST00000411179 201 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC140479.3-201ENST00000418944 1126 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 RAD23BP1-201ENST00000421404 1227 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 ELOCP8-201ENST00000439309 332 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 ELOCP15-201ENST00000442090 332 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 FGF7P3-201ENST00000454645 303 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AP002981.1-201ENST00000517692 975 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AL110118.1-201ENST00000553543 400 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 RPL23AP97-201ENST00000568955 471 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 MIR4270-201ENST00000581799 70 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC090181.2-201ENST00000602975 672 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AL158062.1-201ENST00000619632 745 ntBASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HLA-DPB1P04440 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RNA5SP87-201ENST00000384155 118 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms