Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC017079.1-201ENST00000333650 415 ntBASIC4.78□□□□□ -1.64
RAB28P51157 SNORA51.8-201ENST00000384234 132 ntBASIC4.78□□□□□ -1.64
RAB28P51157 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RAB28P51157 HMGB3P18-201ENST00000406327 590 ntBASIC4.78□□□□□ -1.64
RAB28P51157 COX6B1P1-201ENST00000415962 213 ntBASIC4.78□□□□□ -1.64
RAB28P51157 NPM1P24-201ENST00000428039 894 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AC093414.1-201ENST00000434712 514 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB28P51157 RPL35AP21-201ENST00000437667 333 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB28P51157 AC112498.1-201ENST00000444401 332 ntBASIC4.78□□□□□ -1.64
RAB28P51157 RPS4XP12-201ENST00000461747 709 ntBASIC4.78□□□□□ -1.64
RAB28P51157 CYCSP20-201ENST00000473154 315 ntBASIC4.78□□□□□ -1.64
RAB28P51157 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.78□□□□□ -1.64
RAB28P51157 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RAB28P51157 RNU6-334P-201ENST00000517072 102 ntBASIC4.78□□□□□ -1.64
RAB28P51157 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB28P51157 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB28P51157 BUD31P1-201ENST00000521828 359 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB28P51157 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.78□□□□□ -1.64
RAB28P51157 AC090079.2-201ENST00000575289 768 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.78□□□□□ -1.64
RAB28P51157 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
RAB28P51157 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RAB28P51157 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB28P51157 MTCO1P4-201ENST00000520516 1409 ntBASIC4.78□□□□□ -1.64
RAB28P51157 AL450326.2-201ENST00000421913 1962 ntBASIC4.78□□□□□ -1.64
RAB28P51157 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RAB28P51157 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RAB28P51157 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.78□□□□□ -1.64
RAB28P51157 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 AC011755.1-201ENST00000623763 2049 ntBASIC4.77□□□□□ -1.65
RAB28P51157 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.77□□□□□ -1.65
RAB28P51157 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 AC006042.3-201ENST00000454684 1469 ntBASIC4.77□□□□□ -1.65
RAB28P51157 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RAB28P51157 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RAB28P51157 AC013442.1-201ENST00000397347 228 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AL590290.1-201ENST00000405336 380 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AL445183.3-201ENST00000414168 502 ntBASIC4.77□□□□□ -1.65
RAB28P51157 GTF2IP5-201ENST00000414608 731 ntBASIC4.77□□□□□ -1.65
RAB28P51157 QRSL1P2-201ENST00000418582 964 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC009965.2-201ENST00000425328 970 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 AL353597.2-202ENST00000434901 373 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC073052.1-201ENST00000440417 714 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 ARL5AP2-201ENST00000444698 533 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 SLC25A18P1-201ENST00000449385 454 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 RPL35AP28-201ENST00000459730 331 ntBASIC4.77□□□□□ -1.65
RAB28P51157 RN7SL517P-201ENST00000462240 305 ntBASIC4.77□□□□□ -1.65
RAB28P51157 CCDC75P1-201ENST00000469247 791 ntBASIC4.77□□□□□ -1.65
RAB28P51157 GAPDHP56-201ENST00000506031 988 ntBASIC4.77□□□□□ -1.65
RAB28P51157 BTF3P13-201ENST00000513224 490 ntBASIC4.77□□□□□ -1.65
RAB28P51157 Y_RNA.719-201ENST00000517156 106 ntBASIC4.77□□□□□ -1.65
RAB28P51157 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.77□□□□□ -1.65
RAB28P51157 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.77□□□□□ -1.65
RAB28P51157 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.77□□□□□ -1.65
RAB28P51157 AC106734.1-201ENST00000568646 663 ntBASIC4.77□□□□□ -1.65
RAB28P51157 MIR3908-201ENST00000579798 126 ntBASIC4.77□□□□□ -1.65
RAB28P51157 MIR4660-201ENST00000583549 74 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC026741.1-201ENST00000605892 482 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC120053.1-201ENST00000607706 736 ntBASIC4.77□□□□□ -1.65
RAB28P51157 AC245100.7-201ENST00000609678 442 ntBASIC4.77□□□□□ -1.65
RAB28P51157 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 MTCO1P18-201ENST00000455518 1419 ntBASIC4.77□□□□□ -1.65
RAB28P51157 SOCS5P3-201ENST00000425115 1576 ntBASIC4.77□□□□□ -1.65
RAB28P51157 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
RAB28P51157 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RAB28P51157 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAB28P51157 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms