Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC125257.1-201ENST00000560400 2930 ntBASIC4.83□□□□□ -1.64
BRCC3P46736 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 CPHL1P-201ENST00000461341 3407 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 MIR365B-201ENST00000362317 111 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 SDHCP2-201ENST00000398565 501 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 DHFRP5-201ENST00000406944 564 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 RPL21P43-201ENST00000425440 472 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCC3P46736 GTF3AP5-201ENST00000442645 697 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCC3P46736 AC010618.1-201ENST00000469924 477 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 IGBP1P5-201ENST00000507524 1000 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.82□□□□□ -1.64
BRCC3P46736 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.82□□□□□ -1.64
BRCC3P46736 RNA5SP303-201ENST00000516192 130 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 RNA5SP464-201ENST00000516251 108 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 AP001804.2-201ENST00000533932 910 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.82□□□□□ -1.64
BRCC3P46736 DUX4L52-201ENST00000549363 777 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 AC136624.4-201ENST00000573044 370 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 MIR3939-201ENST00000582614 106 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 MIR3138-201ENST00000585238 82 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 AL159169.2-201ENST00000610061 1269 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.82□□□□□ -1.64
BRCC3P46736 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 AC114781.5-201ENST00000615297 108 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCC3P46736 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 TTC39DP-201ENST00000416781 1688 ntBASIC4.82□□□□□ -1.64
BRCC3P46736 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.82□□□□□ -1.64
BRCC3P46736 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
BRCC3P46736 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.82□□□□□ -1.64
BRCC3P46736 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
BRCC3P46736 AL356317.1-201ENST00000396110 1436 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC008033.1-201ENST00000216407 1162 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRCC3P46736 OR13C3-201ENST00000374781 1108 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AL672167.2-201ENST00000377164 879 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRCC3P46736 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.81□□□□□ -1.64
BRCC3P46736 AL592291.1-201ENST00000403830 352 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 RNU2-22P-201ENST00000411266 212 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCC3P46736 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 NPM1P26-201ENST00000426339 738 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 XKRYP6-201ENST00000440468 1116 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 XKRYP3-201ENST00000442113 1116 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AL591363.1-201ENST00000450091 483 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 PPIAP21-201ENST00000464473 501 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AC105918.1-201ENST00000474399 838 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 NPM1P29-201ENST00000483112 803 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AC068587.1-201ENST00000483613 781 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AGGF1P3-201ENST00000493675 1213 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 HMGB3P16-201ENST00000508037 287 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 RN7SKP34-201ENST00000516142 244 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.81□□□□□ -1.64
BRCC3P46736 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC069366.1-201ENST00000583159 838 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 ADAD1P2-201ENST00000588476 646 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCC3P46736 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 AP000843.1-201ENST00000624880 701 ntBASIC4.81□□□□□ -1.64
BRCC3P46736 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRCC3P46736 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.81□□□□□ -1.64
BRCC3P46736 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.81□□□□□ -1.64
BRCC3P46736 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRCC3P46736 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.8□□□□□ -1.64
BRCC3P46736 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
BRCC3P46736 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms